Cow genome map


           Conread name:
           Lym1-jns23_A07.f
        

               Conread position:
               1-283
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               32, 54
               

               Conread position:
               1-311
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               72, 27
               

               Conread position:
               1-359
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 48
               

               Conread position:
               1-365
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 6
               

               Conread position:
               3-359
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               97-413
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               13, 283
               

               Conread position:
               109-358
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               25, 8
               

               Conread position:
               114-374
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               10, 18
               

               Conread position:
               121-472
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               29, 16
               

               Conread position:
               123-393
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               35, 14
               

               Conread position:
               125-358
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               95, 76
               

               Conread position:
               130-375
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               23, 53
               

               Conread position:
               140-359
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               54, 79
               

               Conread position:
               141-367
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 168
               

               Conread position:
               142-357
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 9
               

               Conread position:
               142-359
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               144-502
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               62, 196
               

               Conread position:
               153-503
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               55, 161
               

               Conread position:
               154-367
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               155-379
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               51, 133
               

               Conread position:
               155-401
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               22, 36
               

               Conread position:
               155-502
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               51, 59
               

               Conread position:
               155-503
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               48, 155
               

               Conread position:
               156-502
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 64
               

               Conread position:
               157-501
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               49, 182
               

               Conread position:
               161-400
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               116, 10
               

               Conread position:
               162-401
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               162-472
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               199, 9
               

               Conread position:
               162-516
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               263
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               167-370
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 203
               

               Conread position:
               167-375
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               109, 28
               

               Conread position:
               167-441
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               36, 169
               

               Conread position:
               168-371
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               26, 47
               

               Conread position:
               182-367
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               60, 13
               

               Conread position:
               182-377
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               184-359
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               35, 20
               

               Conread position:
               185-502
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               93, 16
               

               Conread position:
               185-503
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               92, 14
               

               Conread position:
               185-503
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               81, 36
               

               Conread position:
               190-502
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               74, 210
               

               Conread position:
               190-502
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               191-369
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               193-383
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               203-358
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               203-373
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               64, 17
               

               Conread position:
               203-403
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               72, 16
               

               Conread position:
               203-468
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               200
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               216, 17
               

               Conread position:
               203-503
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               194, 16
               

               Conread position:
               203-503
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               74, 18
               

               Conread position:
               204-387
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               208-358
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               15, 129
               

               Conread position:
               208-502
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               10, 21
               

               Conread position:
               212-365
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 14
               

               Conread position:
               216-394
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               69, 27
               

               Conread position:
               217-359
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               217-371
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               59, 29
               

               Conread position:
               217-379
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               59, 132
               

               Conread position:
               217-469
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               42, 183
               

               Conread position:
               218-358
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               218-369
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               49, 99
               

               Conread position:
               218-502
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               59, 14
               

               Conread position:
               221-357
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               221-359
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               221-377
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               55, 116
               

               Conread position:
               221-401
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               15, 67
               

               Conread position:
               221-472
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               221-502
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               56, 171
               

               Conread position:
               221-503
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               46, 93
               

               Conread position:
               221-529
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               54, 145
               

               Conread position:
               223-376
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               228-373
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               229-393
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               236-511
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 80
               

               Conread position:
               247-381
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               255-511
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               22, 264
               

               Conread position:
               276-503
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               137, 61
               

               Conread position:
               283-395
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.