Cow genome map


           Conread name:
           Lym1-jns23_A07.f
        

               Conread position:
               1-359
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               90, 52
               

               Conread position:
               1-472
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               33-370
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 20
               

               Conread position:
               53-500
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               313
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               38, 173
               

               Conread position:
               65-359
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               97, 90
               

               Conread position:
               86-350
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               99, 46
               

               Conread position:
               97-503
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 40
               

               Conread position:
               123-371
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               144, 26
               

               Conread position:
               127-502
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               29, 93
               

               Conread position:
               139-359
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               24, 44
               

               Conread position:
               139-502
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               254
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               141-367
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               142-375
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               142-381
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               64, 13
               

               Conread position:
               142-396
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               142-502
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               125, 77
               

               Conread position:
               154-359
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               40, 189
               

               Conread position:
               155-359
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               51, 185
               

               Conread position:
               155-369
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               54, 35
               

               Conread position:
               155-391
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 26
               

               Conread position:
               155-394
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 102
               

               Conread position:
               155-502
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               253
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               66, 167
               

               Conread position:
               156-359
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               35, 180
               

               Conread position:
               156-367
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               186, 39
               

               Conread position:
               158-359
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               36, 66
               

               Conread position:
               162-358
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               162-373
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               163-502
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               91, 27
               

               Conread position:
               164-357
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               30, 38
               

               Conread position:
               164-443
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               30, 38
               

               Conread position:
               167-359
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               167-503
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               60, 14
               

               Conread position:
               168-359
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               169-371
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               109, 34
               

               Conread position:
               178-503
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               235
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 50
               

               Conread position:
               181-397
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               38, 77
               

               Conread position:
               182-502
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 48
               

               Conread position:
               184-391
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 10
               

               Conread position:
               185-375
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               32, 71
               

               Conread position:
               186-367
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 22
               

               Conread position:
               186-489
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               8, 254
               

               Conread position:
               190-372
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               77, 30
               

               Conread position:
               190-502
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 117
               

               Conread position:
               190-504
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               231
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               27, 60
               

               Conread position:
               193-366
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               201-378
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               47, 7
               

               Conread position:
               202-492
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               203-357
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               203-367
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               203-373
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               203-438
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               158, 23
               

               Conread position:
               203-501
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               73, 133
               

               Conread position:
               204-502
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               23, 190
               

               Conread position:
               207-502
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               68, 141
               

               Conread position:
               208-375
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               17, 60
               

               Conread position:
               208-376
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 41
               

               Conread position:
               208-387
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 48
               

               Conread position:
               208-501
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               15, 203
               

               Conread position:
               214-469
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               63, 124
               

               Conread position:
               216-387
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               217-369
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               221-367
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               221-377
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               221-401
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               223-400
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               225-374
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               52, 112
               

               Conread position:
               225-454
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               52, 36
               

               Conread position:
               229-359
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               229-516
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               38, 85
               

               Conread position:
               236-381
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               236-423
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               99, 43
               

               Conread position:
               240-383
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 97
               

               Conread position:
               242-381
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               243-502
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               32, 56
               

               Conread position:
               256-468
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               21, 81
               
Show alignments to all cow chromosomes.