Cow genome map


           Conread name:
           Lym1-jns23_A07.f
        

               Conread position:
               32-503
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 28
               

               Conread position:
               35-356
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               12, 191
               

               Conread position:
               88-525
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               97-365
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               9, 16
               

               Conread position:
               109-359
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               48, 8
               

               Conread position:
               109-502
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               47, 22
               

               Conread position:
               112-503
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               276
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               17, 40
               

               Conread position:
               121-359
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               125-402
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               128-357
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               66, 28
               

               Conread position:
               128-373
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               27, 110
               

               Conread position:
               133-472
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               23, 9
               

               Conread position:
               134-377
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               14, 148
               

               Conread position:
               138-365
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               23, 59
               

               Conread position:
               138-424
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 75
               

               Conread position:
               143-353
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               14, 6
               

               Conread position:
               155-373
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               16, 36
               

               Conread position:
               155-381
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               48, 184
               

               Conread position:
               155-383
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               116, 70
               

               Conread position:
               155-410
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               65, 250
               

               Conread position:
               156-371
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               111, 41
               

               Conread position:
               156-509
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               40, 211
               

               Conread position:
               157-375
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               162-359
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               114, 9
               

               Conread position:
               162-371
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 77
               

               Conread position:
               162-401
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               167-359
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               167-389
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               167-502
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               37, 132
               

               Conread position:
               167-503
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 55
               

               Conread position:
               181-457
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               23, 231
               

               Conread position:
               182-367
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               94, 38
               

               Conread position:
               182-373
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               186-371
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               186-393
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 41
               

               Conread position:
               186-502
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               81, 20
               

               Conread position:
               187-490
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               7, 29
               

               Conread position:
               188-502
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               79, 11
               

               Conread position:
               188-504
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 31
               

               Conread position:
               190-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 133
               

               Conread position:
               192-502
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               28, 21
               

               Conread position:
               201-502
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               234
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               66, 120
               

               Conread position:
               203-400
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               72, 17
               

               Conread position:
               206-359
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               207-359
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               17, 24
               

               Conread position:
               207-502
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               10, 40
               

               Conread position:
               208-373
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               208-503
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               220
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               8, 22
               

               Conread position:
               209-367
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               210-399
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               66, 127
               

               Conread position:
               212-359
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               10, 62
               

               Conread position:
               214-368
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               13, 57
               

               Conread position:
               217-472
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               59, 144
               

               Conread position:
               221-357
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               221-359
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               221-399
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               56, 40
               

               Conread position:
               221-503
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               222-369
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               222-502
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               33, 52
               

               Conread position:
               222-502
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               188, 49
               

               Conread position:
               222-502
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               45, 120
               

               Conread position:
               223-502
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               251, 38
               

               Conread position:
               228-502
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               228-502
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               236-502
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               255-401
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               256-502
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               15, 82
               

               Conread position:
               260-397
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               275-480
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               142, 59
               

               Conread position:
               320-501
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               154, 58
               
Show alignments to all cow chromosomes.