Cow genome map


           Conread name:
           Lym1-jns23_A07.f
        

               Conread position:
               1-236
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               26, 54
               

               Conread position:
               1-502
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 54
               

               Conread position:
               6-223
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               22-380
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               64, 31
               

               Conread position:
               36-222
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 17
               

               Conread position:
               54-359
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               37, 92
               

               Conread position:
               54-501
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               311
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               32, 355
               

               Conread position:
               85-513
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 68
               

               Conread position:
               96-377
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               112-342
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               115-373
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               15, 41
               

               Conread position:
               119-359
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 78
               

               Conread position:
               123-358
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               18, 95
               

               Conread position:
               123-505
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               284
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               25, 55
               

               Conread position:
               133-358
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               133-373
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               139-373
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               14, 45
               

               Conread position:
               141-359
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 60
               

               Conread position:
               142-357
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               9, 31
               

               Conread position:
               142-359
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               77, 58
               

               Conread position:
               142-467
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               15, 39
               

               Conread position:
               144-368
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 73
               

               Conread position:
               150-345
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 25
               

               Conread position:
               153-359
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               154-357
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               154-503
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               155-487
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               230
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               122, 65
               

               Conread position:
               155-502
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               50, 167
               

               Conread position:
               155-502
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               23, 118
               

               Conread position:
               155-520
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               230
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               56, 12
               

               Conread position:
               156-350
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               156-358
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               162-373
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               60, 9
               

               Conread position:
               167-359
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               167-371
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               27, 48
               

               Conread position:
               167-373
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               167-374
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               179-455
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               181-502
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               94, 136
               

               Conread position:
               184-359
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               93, 15
               

               Conread position:
               186-492
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               17, 41
               

               Conread position:
               186-502
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               186-503
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 43
               

               Conread position:
               187-359
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               91, 33
               

               Conread position:
               189-393
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               191-359
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               202-380
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               63, 18
               

               Conread position:
               203-491
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               74, 15
               

               Conread position:
               204-504
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               13, 61
               

               Conread position:
               208-375
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               208-400
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               208-489
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               212-502
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 5
               

               Conread position:
               213-502
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 50
               

               Conread position:
               214-359
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               62, 122
               

               Conread position:
               214-369
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 99
               

               Conread position:
               217-519
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               54, 24
               

               Conread position:
               218-371
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               58, 23
               

               Conread position:
               219-499
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               255, 54
               

               Conread position:
               221-356
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               55, 20
               

               Conread position:
               221-372
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               46, 16
               

               Conread position:
               221-373
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               55, 117
               

               Conread position:
               221-502
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               55, 142
               

               Conread position:
               221-503
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               47, 117
               

               Conread position:
               222-400
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               222-498
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               49, 180
               

               Conread position:
               232-502
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               45, 36
               

               Conread position:
               238-353
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               244-385
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               246-379
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               31, 91
               

               Conread position:
               246-503
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               255-502
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               22, 73
               

               Conread position:
               262-504
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               281-472
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               158
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               136, 28
               

               Conread position:
               332-482
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               98, 62
               

               Conread position:
               340-517
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               21, 0
               
Show alignments to all cow chromosomes.