Cow genome map


           Conread name:
           Lym1-jns23_A07.f
        

               Conread position:
               7-359
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               22, 48
               

               Conread position:
               40-358
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               68-367
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 43
               

               Conread position:
               85-370
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               57, 144
               

               Conread position:
               97-350
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               48, 126
               

               Conread position:
               112-359
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               122-503
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               128-356
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               132-375
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               71, 23
               

               Conread position:
               139-359
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               142-371
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               14, 133
               

               Conread position:
               142-485
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               142-499
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               250
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               30, 13
               

               Conread position:
               144-359
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               50, 75
               

               Conread position:
               149-398
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               154-385
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               43, 153
               

               Conread position:
               155-369
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 60
               

               Conread position:
               155-503
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               39, 184
               

               Conread position:
               156-359
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               156-371
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               38, 187
               

               Conread position:
               156-371
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               111, 58
               

               Conread position:
               156-501
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               239
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               67, 246
               

               Conread position:
               156-503
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               157-374
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               119, 54
               

               Conread position:
               158-383
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               161-506
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 184
               

               Conread position:
               163-502
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               82, 8
               

               Conread position:
               167-359
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               60, 28
               

               Conread position:
               167-387
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               167-521
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               27, 215
               

               Conread position:
               182-404
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               21, 12
               

               Conread position:
               186-359
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               186-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 34
               

               Conread position:
               188-449
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               79, 26
               

               Conread position:
               188-491
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               79, 32
               

               Conread position:
               190-358
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               190-359
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               39, 18
               

               Conread position:
               197-515
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               226
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               30, 306
               

               Conread position:
               201-504
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               19, 100
               

               Conread position:
               203-359
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               65, 16
               

               Conread position:
               203-359
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               75, 23
               

               Conread position:
               203-367
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               203-407
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               209-401
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               11, 87
               

               Conread position:
               216-398
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               120, 55
               

               Conread position:
               217-504
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               50, 106
               

               Conread position:
               221-372
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               114, 52
               

               Conread position:
               221-373
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               55, 118
               

               Conread position:
               221-490
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               205, 55
               

               Conread position:
               221-501
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               55, 116
               

               Conread position:
               221-502
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               54, 113
               

               Conread position:
               221-503
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               51, 145
               

               Conread position:
               222-358
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               222-373
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               50, 147
               

               Conread position:
               222-483
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               194
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               39, 55
               

               Conread position:
               228-404
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 115
               

               Conread position:
               229-487
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               47, 94
               

               Conread position:
               238-371
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               39, 99
               

               Conread position:
               242-401
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               255-378
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               255-503
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 82
               

               Conread position:
               338-503
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               72, 61
               
Show alignments to all cow chromosomes.