Cow genome map
| Conread name: | Lym1-jns23_A07.f |
| Conread position: | 1-372 |
| Cow position: | chr23:26435336-26435721 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 54 |
| Conread position: | 32-359 |
| Cow position: | chr23:5883626-5883272 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 85-369 |
| Cow position: | chr23:15728653-15728949 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 84, 241 |
| Conread position: | 96-375 |
| Cow position: | chr23:5737704-5737994 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 97-358 |
| Cow position: | chr23:1883410-1883143 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 13, 82 |
| Conread position: | 97-459 |
| Cow position: | chr23:16881147-16881509 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 45, 29 |
| Conread position: | 112-359 |
| Cow position: | chr23:16058593-16058348 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 14, 61 |
| Conread position: | 120-358 |
| Cow position: | chr23:12408516-12408761 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 31 |
| Conread position: | 130-353 |
| Cow position: | chr23:3715755-3715520 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 24, 200 |
| Conread position: | 130-401 |
| Cow position: | chr23:29242926-29242651 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 8, 44 |
| Conread position: | 133-372 |
| Cow position: | chr23:29459108-29459352 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 10, 112 |
| Conread position: | 135-392 |
| Cow position: | chr23:14662029-14662280 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 132, 21 |
| Conread position: | 136-359 |
| Cow position: | chr23:25531474-25531695 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 31 |
| Conread position: | 137-375 |
| Cow position: | chr23:22588292-22588537 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 19 |
| Conread position: | 138-504 |
| Cow position: | chr23:9725255-9725616 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 14, 32 |
| Conread position: | 139-367 |
| Cow position: | chr23:10415055-10415285 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 18, 10 |
| Conread position: | 146-501 |
| Cow position: | chr23:11380287-11380649 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 177 |
| Conread position: | 151-359 |
| Cow position: | chr23:16170649-16170448 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 155-492 |
| Cow position: | chr23:9711626-9711965 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 39, 78 |
| Conread position: | 156-373 |
| Cow position: | chr23:16609852-16610075 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 162-370 |
| Cow position: | chr23:14164460-14164662 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 167-373 |
| Cow position: | chr23:3247529-3247323 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 106 |
| Conread position: | 168-502 |
| Cow position: | chr23:29742333-29741982 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 249 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 13, 49 |
| Conread position: | 169-374 |
| Cow position: | chr23:2371315-2371116 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 48 |
| Conread position: | 169-503 |
| Cow position: | chr23:21631161-21630842 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 166, 25 |
| Conread position: | 186-503 |
| Cow position: | chr23:28700924-28700608 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 81, 28 |
| Conread position: | 200-359 |
| Cow position: | chr23:27563801-27563960 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 76, 21 |
| Conread position: | 202-367 |
| Cow position: | chr23:20744687-20744848 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 203-358 |
| Cow position: | chr23:28366422-28366576 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 74, 22 |
| Conread position: | 207-367 |
| Cow position: | chr23:26003967-26003805 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 208-353 |
| Cow position: | chr23:7321899-7322042 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 27, 85 |
| Conread position: | 208-359 |
| Cow position: | chr23:7937642-7937790 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 69, 45 |
| Conread position: | 208-502 |
| Cow position: | chr23:21394665-21394967 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 208-503 |
| Cow position: | chr23:11434361-11434640 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 264, 6 |
| Conread position: | 218-504 |
| Cow position: | chr23:26067004-26066727 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 200, 51 |
| Conread position: | 219-502 |
| Cow position: | chr23:30912404-30912675 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 8, 174 |
| Conread position: | 221-381 |
| Cow position: | chr23:38414070-38414230 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 27 |
| Conread position: | 221-482 |
| Cow position: | chr23:17092596-17092863 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 16, 11 |
| Conread position: | 221-502 |
| Cow position: | chr23:11933136-11932848 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 59, 196 |
| Conread position: | 222-371 |
| Cow position: | chr23:26461962-26462112 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 222-401 |
| Cow position: | chr23:11853513-11853693 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 47, 108 |
| Conread position: | 223-400 |
| Cow position: | chr23:3967665-3967839 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 231-358 |
| Cow position: | chr23:28026726-28026596 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 232-375 |
| Cow position: | chr23:11129111-11128967 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 232-503 |
| Cow position: | chr23:11209890-11209623 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 35, 168 |
| Conread position: | 236-503 |
| Cow position: | chr23:39806743-39806490 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 41, 17 |
| Conread position: | 256-387 |
| Cow position: | chr23:11054971-11054839 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 257-402 |
| Cow position: | chr23:26795052-26795198 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 294-502 |
| Cow position: | chr23:2269478-2269685 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 110, 38 |
Show alignments to all cow chromosomes.