Cow genome map
Conread name: | Lym1-jns23_A07.f |
Conread position: | 1-282 |
Cow position: | chr24:14724806-14724509 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 202 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 85, 52 |
Conread position: | 2-493 |
Cow position: | chr24:40257392-40257881 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 364 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 51 |
Conread position: | 3-212 |
Cow position: | chr24:16844220-16844421 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 155 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 85, 25 |
Conread position: | 9-298 |
Cow position: | chr24:30710965-30710673 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 197 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 20, 53 |
Conread position: | 91-501 |
Cow position: | chr24:17763274-17763661 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 273 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 52, 26 |
Conread position: | 107-371 |
Cow position: | chr24:30900249-30900516 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 176 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 14, 85 |
Conread position: | 115-359 |
Cow position: | chr24:39955067-39955323 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 176 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 127-359 |
Cow position: | chr24:39681815-39681578 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 164 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 9, 73 |
Conread position: | 130-505 |
Cow position: | chr24:25229096-25229476 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 263 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 16, 216 |
Conread position: | 134-375 |
Cow position: | chr24:29845325-29845563 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 165 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 142, 50 |
Conread position: | 135-407 |
Cow position: | chr24:39742778-39742502 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 189 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 21, 35 |
Conread position: | 140-377 |
Cow position: | chr24:28028762-28029000 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 170 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 15, 9 |
Conread position: | 141-373 |
Cow position: | chr24:6149966-6149739 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 158 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 72, 21 |
Conread position: | 142-502 |
Cow position: | chr24:37386409-37386756 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 242 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 85, 13 |
Conread position: | 145-503 |
Cow position: | chr24:6507829-6508188 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 22 |
Conread position: | 146-366 |
Cow position: | chr24:39500339-39500567 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 157 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 155-356 |
Cow position: | chr24:35529850-35529649 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 142 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 121, 49 |
Conread position: | 155-357 |
Cow position: | chr24:43733901-43733694 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 153 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 155-369 |
Cow position: | chr24:37204948-37205167 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 156 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 155-491 |
Cow position: | chr24:30860567-30860241 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 233 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 51, 186 |
Conread position: | 155-503 |
Cow position: | chr24:18076077-18075740 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 244 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 40, 62 |
Conread position: | 156-353 |
Cow position: | chr24:16476332-16476136 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 138 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 120, 26 |
Conread position: | 157-383 |
Cow position: | chr24:6061469-6061692 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 157 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 51, 181 |
Conread position: | 162-374 |
Cow position: | chr24:35836320-35836530 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 149 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 113, 32 |
Conread position: | 167-353 |
Cow position: | chr24:27259064-27259250 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 132 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 63, 37 |
Conread position: | 167-502 |
Cow position: | chr24:23694977-23695322 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 18 |
Conread position: | 167-503 |
Cow position: | chr24:32758841-32759184 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 250 |
Alignm E-value: | 7.9874e-44 |
Alignm gaps (pig, cow): | 27, 240 |
Conread position: | 169-530 |
Cow position: | chr24:28279557-28279187 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 248 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 13, 34 |
Conread position: | 171-369 |
Cow position: | chr24:32669190-32668989 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 143 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 96, 26 |
Conread position: | 182-373 |
Cow position: | chr24:814362-814556 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 133 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 182-503 |
Cow position: | chr24:2730672-2730979 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 228 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 94, 21 |
Conread position: | 186-503 |
Cow position: | chr24:13783600-13783929 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 234 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 85, 28 |
Conread position: | 188-365 |
Cow position: | chr24:15919600-15919421 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 131 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 79, 24 |
Conread position: | 188-367 |
Cow position: | chr24:27683542-27683727 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 132 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 15, 40 |
Conread position: | 188-502 |
Cow position: | chr24:27096579-27096262 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 214 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 6, 91 |
Conread position: | 188-502 |
Cow position: | chr24:27608208-27608540 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 231 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 89, 13 |
Conread position: | 190-407 |
Cow position: | chr24:25112099-25111877 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 162 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 27, 39 |
Conread position: | 190-407 |
Cow position: | chr24:33723952-33724188 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 166 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 190-501 |
Cow position: | chr24:31816482-31816155 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 224 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 33, 51 |
Conread position: | 190-503 |
Cow position: | chr24:39259060-39258738 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 224 |
Alignm E-value: | 7.00649e-43 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 194-503 |
Cow position: | chr24:39607660-39607989 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 242 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 203-358 |
Cow position: | chr24:29673397-29673243 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 114 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 74, 22 |
Conread position: | 203-504 |
Cow position: | chr24:17860378-17860675 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 202 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 203, 16 |
Conread position: | 208-373 |
Cow position: | chr24:27844646-27844811 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 120 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 15, 34 |
Conread position: | 208-500 |
Cow position: | chr24:42943248-42943544 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 20 |
Conread position: | 209-406 |
Cow position: | chr24:33526445-33526645 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 146 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 58, 7 |
Conread position: | 210-359 |
Cow position: | chr24:27229177-27229322 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 114 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 65, 109 |
Conread position: | 211-378 |
Cow position: | chr24:23685189-23685357 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 117 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 217-502 |
Cow position: | chr24:36730366-36730076 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 208 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 59, 113 |
Conread position: | 217-503 |
Cow position: | chr24:45004822-45004530 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 192 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 35, 67 |
Conread position: | 218-371 |
Cow position: | chr24:15639032-15639189 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 116 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 49, 124 |
Conread position: | 221-359 |
Cow position: | chr24:28060564-28060703 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 105 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 6, 118 |
Conread position: | 221-410 |
Cow position: | chr24:33579332-33579137 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 139 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 46, 7 |
Conread position: | 222-379 |
Cow position: | chr24:8591203-8591041 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 121 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 10, 120 |
Conread position: | 240-375 |
Cow position: | chr24:36345039-36345170 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 242-517 |
Cow position: | chr24:25991317-25991578 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 193 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 184, 25 |
Conread position: | 255-502 |
Cow position: | chr24:16267619-16267378 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 172 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 210, 136 |
Conread position: | 255-502 |
Cow position: | chr24:30545028-30545277 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 178 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 22, 157 |
Conread position: | 257-396 |
Cow position: | chr24:27629912-27630052 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 105 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 263-402 |
Cow position: | chr24:31845630-31845771 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 117 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 303-499 |
Cow position: | chr24:24457750-24457955 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 156 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 58, 0 |
Show alignments to all cow chromosomes.