Cow genome map


           Conread name:
           Lym1-jns23_A07.f
        

               Conread position:
               1-282
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               85, 52
               

               Conread position:
               2-493
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 51
               

               Conread position:
               3-212
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               85, 25
               

               Conread position:
               9-298
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               20, 53
               

               Conread position:
               91-501
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               273
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               52, 26
               

               Conread position:
               107-371
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               14, 85
               

               Conread position:
               115-359
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               127-359
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               9, 73
               

               Conread position:
               130-505
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               16, 216
               

               Conread position:
               134-375
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               142, 50
               

               Conread position:
               135-407
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 35
               

               Conread position:
               140-377
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 9
               

               Conread position:
               141-373
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               142-502
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               85, 13
               

               Conread position:
               145-503
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 22
               

               Conread position:
               146-366
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               155-356
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               121, 49
               

               Conread position:
               155-357
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               155-369
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               155-491
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               51, 186
               

               Conread position:
               155-503
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               40, 62
               

               Conread position:
               156-353
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               120, 26
               

               Conread position:
               157-383
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               51, 181
               

               Conread position:
               162-374
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               113, 32
               

               Conread position:
               167-353
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               63, 37
               

               Conread position:
               167-502
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               167-503
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               250
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               27, 240
               

               Conread position:
               169-530
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               248
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               171-369
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               96, 26
               

               Conread position:
               182-373
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               182-503
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               94, 21
               

               Conread position:
               186-503
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               85, 28
               

               Conread position:
               188-365
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               79, 24
               

               Conread position:
               188-367
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 40
               

               Conread position:
               188-502
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               6, 91
               

               Conread position:
               188-502
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               89, 13
               

               Conread position:
               190-407
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               27, 39
               

               Conread position:
               190-407
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               190-501
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               33, 51
               

               Conread position:
               190-503
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               224
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               194-503
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               203-358
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               74, 22
               

               Conread position:
               203-504
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               203, 16
               

               Conread position:
               208-373
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               208-500
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 20
               

               Conread position:
               209-406
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               58, 7
               

               Conread position:
               210-359
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               65, 109
               

               Conread position:
               211-378
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               217-502
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               59, 113
               

               Conread position:
               217-503
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               35, 67
               

               Conread position:
               218-371
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               49, 124
               

               Conread position:
               221-359
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               6, 118
               

               Conread position:
               221-410
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               46, 7
               

               Conread position:
               222-379
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               10, 120
               

               Conread position:
               240-375
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               242-517
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               184, 25
               

               Conread position:
               255-502
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               210, 136
               

               Conread position:
               255-502
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               22, 157
               

               Conread position:
               257-396
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               263-402
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               303-499
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               58, 0
               
Show alignments to all cow chromosomes.