Cow genome map
| Conread name: | Lym1-jns23_A07.f |
| Conread position: | 1-374 |
| Cow position: | chr25:28326979-28327360 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 54 |
| Conread position: | 32-367 |
| Cow position: | chr25:36513574-36513255 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 129-502 |
| Cow position: | chr25:34236587-34236956 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 33, 56 |
| Conread position: | 132-365 |
| Cow position: | chr25:40957012-40957247 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 62, 173 |
| Conread position: | 133-355 |
| Cow position: | chr25:12234787-12235009 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 86, 70 |
| Conread position: | 133-502 |
| Cow position: | chr25:10012071-10012429 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 267 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 63, 121 |
| Conread position: | 142-401 |
| Cow position: | chr25:18453095-18452827 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 46, 87 |
| Conread position: | 143-373 |
| Cow position: | chr25:18206338-18206568 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 8, 14 |
| Conread position: | 156-372 |
| Cow position: | chr25:25051429-25051652 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 38, 42 |
| Conread position: | 157-348 |
| Cow position: | chr25:30035497-30035304 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 46, 33 |
| Conread position: | 160-497 |
| Cow position: | chr25:26757384-26757060 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 34, 54 |
| Conread position: | 162-502 |
| Cow position: | chr25:12081384-12081729 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 114, 9 |
| Conread position: | 168-379 |
| Cow position: | chr25:5837026-5837241 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 53 |
| Conread position: | 188-380 |
| Cow position: | chr25:33260657-33260464 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 6, 34 |
| Conread position: | 188-502 |
| Cow position: | chr25:24136516-24136819 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 7, 146 |
| Conread position: | 190-501 |
| Cow position: | chr25:24405819-24406144 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 269 |
| Conread position: | 191-501 |
| Cow position: | chr25:5567820-5568135 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 76, 8 |
| Conread position: | 192-356 |
| Cow position: | chr25:23410577-23410411 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 203-401 |
| Cow position: | chr25:24452268-24452465 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 207-363 |
| Cow position: | chr25:31586941-31586780 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 208-373 |
| Cow position: | chr25:21245710-21245875 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 68, 129 |
| Conread position: | 208-376 |
| Cow position: | chr25:18934974-18935147 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 12, 96 |
| Conread position: | 208-504 |
| Cow position: | chr25:24302339-24302632 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 130 |
| Conread position: | 216-470 |
| Cow position: | chr25:11131470-11131211 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 60, 119 |
| Conread position: | 216-502 |
| Cow position: | chr25:38135636-38135352 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 61, 52 |
| Conread position: | 221-377 |
| Cow position: | chr25:22909959-22910117 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 6, 117 |
| Conread position: | 222-359 |
| Cow position: | chr25:7306185-7306043 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 222-359 |
| Cow position: | chr25:26238754-26238616 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 222-367 |
| Cow position: | chr25:9842887-9842737 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 50, 86 |
| Conread position: | 222-462 |
| Cow position: | chr25:36036897-36037125 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 54, 163 |
| Conread position: | 222-503 |
| Cow position: | chr25:16691403-16691128 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 43, 155 |
| Conread position: | 227-503 |
| Cow position: | chr25:24168023-24168306 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 40, 110 |
| Conread position: | 228-372 |
| Cow position: | chr25:3992671-3992522 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 92 |
| Conread position: | 237-503 |
| Cow position: | chr25:18425193-18424913 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 11, 59 |
| Conread position: | 255-377 |
| Cow position: | chr25:37006834-37006957 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 255-501 |
| Cow position: | chr25:27510381-27510633 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 22, 60 |
| Conread position: | 255-502 |
| Cow position: | chr25:13940860-13941108 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 256-502 |
| Cow position: | chr25:37594263-37594022 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 136 |
| Conread position: | 261-503 |
| Cow position: | chr25:13443756-13444009 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 131 |
| Conread position: | 272-503 |
| Cow position: | chr25:20007980-20007744 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 8, 133 |
Show alignments to all cow chromosomes.