Cow genome map
| Conread name: | Lym1-jns23_A07.f |
| Conread position: | 1-150 |
| Cow position: | chr27:7094146-7094292 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 137, 52 |
| Conread position: | 7-502 |
| Cow position: | chr27:20120291-20120795 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 355 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 84, 22 |
| Conread position: | 32-367 |
| Cow position: | chr27:11724043-11723687 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 59, 28 |
| Conread position: | 128-503 |
| Cow position: | chr27:15200676-15201057 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 51 |
| Conread position: | 134-373 |
| Cow position: | chr27:26441080-26440835 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 60, 210 |
| Conread position: | 143-375 |
| Cow position: | chr27:29019763-29019521 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 145-356 |
| Cow position: | chr27:13860742-13860536 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 149-375 |
| Cow position: | chr27:22179790-22179572 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 23 |
| Conread position: | 154-402 |
| Cow position: | chr27:11762733-11762487 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 41, 59 |
| Conread position: | 155-368 |
| Cow position: | chr27:30560916-30561130 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 50, 42 |
| Conread position: | 155-502 |
| Cow position: | chr27:12241031-12240689 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 60 |
| Conread position: | 157-358 |
| Cow position: | chr27:29038935-29038732 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 46, 60 |
| Conread position: | 162-501 |
| Cow position: | chr27:20765945-20765620 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 115, 19 |
| Conread position: | 167-425 |
| Cow position: | chr27:19577688-19577948 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 173 |
| Conread position: | 167-501 |
| Cow position: | chr27:25676240-25676593 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 23 |
| Conread position: | 167-502 |
| Cow position: | chr27:10307288-10306946 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 17, 242 |
| Conread position: | 204-374 |
| Cow position: | chr27:1998191-1998361 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 72, 16 |
| Conread position: | 204-406 |
| Cow position: | chr27:19543852-19543653 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 204-502 |
| Cow position: | chr27:6523098-6523385 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 72, 16 |
| Conread position: | 208-359 |
| Cow position: | chr27:4508513-4508662 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 15, 97 |
| Conread position: | 208-503 |
| Cow position: | chr27:2847949-2848246 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 9, 91 |
| Conread position: | 214-502 |
| Cow position: | chr27:28685206-28685491 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 192, 122 |
| Conread position: | 217-353 |
| Cow position: | chr27:31267216-31267077 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 217-357 |
| Cow position: | chr27:13847705-13847846 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 217-376 |
| Cow position: | chr27:4664538-4664696 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 36 |
| Conread position: | 217-502 |
| Cow position: | chr27:25471202-25471489 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 49, 138 |
| Conread position: | 221-359 |
| Cow position: | chr27:630391-630530 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 221-359 |
| Cow position: | chr27:16784826-16784963 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 55, 28 |
| Conread position: | 221-359 |
| Cow position: | chr27:22518699-22518837 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 36, 63 |
| Conread position: | 221-372 |
| Cow position: | chr27:12650560-12650407 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 55, 146 |
| Conread position: | 221-406 |
| Cow position: | chr27:13921742-13921556 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 7 |
| Conread position: | 221-502 |
| Cow position: | chr27:21578532-21578242 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 221-518 |
| Cow position: | chr27:30446271-30446566 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 112, 54 |
| Conread position: | 240-377 |
| Cow position: | chr27:13696428-13696290 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 31, 131 |
| Conread position: | 248-502 |
| Cow position: | chr27:4295333-4295084 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 140 |
| Conread position: | 255-465 |
| Cow position: | chr27:29860808-29860601 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 80 |
| Conread position: | 263-502 |
| Cow position: | chr27:6641337-6641586 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 272-500 |
| Cow position: | chr27:12112613-12112388 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 145 |
| Conread position: | 300-504 |
| Cow position: | chr27:7648415-7648202 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 61, 35 |
Show alignments to all cow chromosomes.