Cow genome map
Conread name: | Lym1-jns23_A07.f |
Conread position: | 1-397 |
Cow position: | chr28:29077711-29077290 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 291 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 81, 36 |
Conread position: | 32-502 |
Cow position: | chr28:22081668-22081178 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 21 |
Conread position: | 52-415 |
Cow position: | chr28:25797190-25796812 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 258 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 8, 13 |
Conread position: | 97-502 |
Cow position: | chr28:11380022-11380430 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 282 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 29, 22 |
Conread position: | 113-502 |
Cow position: | chr28:7607235-7606841 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 264 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 35, 7 |
Conread position: | 125-373 |
Cow position: | chr28:16441370-16441126 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 170 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 54, 26 |
Conread position: | 135-373 |
Cow position: | chr28:3914691-3914449 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 161 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 59, 204 |
Conread position: | 138-513 |
Cow position: | chr28:15689017-15688642 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 260 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 13, 23 |
Conread position: | 139-373 |
Cow position: | chr28:5805486-5805264 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 164 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 7, 18 |
Conread position: | 143-358 |
Cow position: | chr28:6486565-6486347 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 157 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 51, 17 |
Conread position: | 148-504 |
Cow position: | chr28:20265355-20265006 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 249 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 8, 25 |
Conread position: | 149-392 |
Cow position: | chr28:2340500-2340251 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 182 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 8, 17 |
Conread position: | 155-367 |
Cow position: | chr28:31971795-31972002 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 150 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 34, 122 |
Conread position: | 155-415 |
Cow position: | chr28:28414633-28414367 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 186 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 51, 186 |
Conread position: | 155-423 |
Cow position: | chr28:14218515-14218789 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 190 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 40, 141 |
Conread position: | 156-327 |
Cow position: | chr28:21940156-21939980 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 129 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 47, 25 |
Conread position: | 156-353 |
Cow position: | chr28:10456574-10456763 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 139 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 120, 25 |
Conread position: | 156-502 |
Cow position: | chr28:21873729-21873381 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 79 |
Conread position: | 163-373 |
Cow position: | chr28:31871801-31872008 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 150 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 8, 19 |
Conread position: | 167-356 |
Cow position: | chr28:16109884-16109700 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 136 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 110, 32 |
Conread position: | 169-503 |
Cow position: | chr28:34150581-34150904 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 227 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 37, 199 |
Conread position: | 182-502 |
Cow position: | chr28:19079916-19080238 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 214 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 80, 21 |
Conread position: | 187-359 |
Cow position: | chr28:15272335-15272508 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 122 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 61, 53 |
Conread position: | 187-359 |
Cow position: | chr28:25334952-25334773 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 134 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 187-367 |
Cow position: | chr28:10642094-10642274 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 134 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 89, 13 |
Conread position: | 190-356 |
Cow position: | chr28:13902040-13902203 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 86, 16 |
Conread position: | 191-359 |
Cow position: | chr28:22583556-22583385 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 128 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 33, 150 |
Conread position: | 201-373 |
Cow position: | chr28:13356680-13356846 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 123 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 201-375 |
Cow position: | chr28:22351411-22351230 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 129 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 201-502 |
Cow position: | chr28:31415515-31415826 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 135 |
Conread position: | 203-359 |
Cow position: | chr28:16475908-16475748 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 125 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 16, 137 |
Conread position: | 208-359 |
Cow position: | chr28:2905486-2905333 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 114 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 208-380 |
Cow position: | chr28:5773542-5773374 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 123 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 69, 12 |
Conread position: | 208-388 |
Cow position: | chr28:13176772-13176955 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 131 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 64, 12 |
Conread position: | 208-401 |
Cow position: | chr28:4841486-4841686 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 147 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 9, 154 |
Conread position: | 209-505 |
Cow position: | chr28:12864940-12864643 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 205 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 20, 136 |
Conread position: | 217-353 |
Cow position: | chr28:16686926-16686791 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 105 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 59, 50 |
Conread position: | 217-359 |
Cow position: | chr28:30978173-30978035 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 106 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 217-371 |
Cow position: | chr28:7697107-7697261 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 114 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 59, 100 |
Conread position: | 217-376 |
Cow position: | chr28:5255645-5255486 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 119 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 59, 43 |
Conread position: | 218-359 |
Cow position: | chr28:29455762-29455904 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 106 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 218-380 |
Cow position: | chr28:28590633-28590471 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 120 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 60, 119 |
Conread position: | 221-359 |
Cow position: | chr28:13936307-13936169 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 105 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 56, 7 |
Conread position: | 221-503 |
Cow position: | chr28:23793411-23793688 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 205 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 56, 117 |
Conread position: | 221-503 |
Cow position: | chr28:25315089-25314812 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 198 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 58, 140 |
Conread position: | 222-393 |
Cow position: | chr28:2862756-2862580 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 126 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 242-503 |
Cow position: | chr28:1537576-1537312 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 184 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 35, 13 |
Conread position: | 253-503 |
Cow position: | chr28:3820313-3820558 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 181 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 79, 65 |
Conread position: | 267-500 |
Cow position: | chr28:19961755-19961523 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 174 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 9, 34 |
Conread position: | 273-503 |
Cow position: | chr28:32747777-32747546 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 166 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 149, 30 |
Conread position: | 277-501 |
Cow position: | chr28:27428587-27428356 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 157 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 299-503 |
Cow position: | chr28:14721007-14721208 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 156 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 111, 10 |
Show alignments to all cow chromosomes.