Cow genome map


           Conread name:
           Lym1-jns23_A07.f
        

               Conread position:
               1-397
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               81, 36
               

               Conread position:
               32-502
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 21
               

               Conread position:
               52-415
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               8, 13
               

               Conread position:
               97-502
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               282
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               29, 22
               

               Conread position:
               113-502
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               35, 7
               

               Conread position:
               125-373
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               54, 26
               

               Conread position:
               135-373
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               59, 204
               

               Conread position:
               138-513
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               139-373
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               143-358
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               51, 17
               

               Conread position:
               148-504
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               149-392
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               8, 17
               

               Conread position:
               155-367
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               34, 122
               

               Conread position:
               155-415
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               51, 186
               

               Conread position:
               155-423
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               40, 141
               

               Conread position:
               156-327
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 25
               

               Conread position:
               156-353
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               120, 25
               

               Conread position:
               156-502
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 79
               

               Conread position:
               163-373
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 19
               

               Conread position:
               167-356
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               110, 32
               

               Conread position:
               169-503
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               37, 199
               

               Conread position:
               182-502
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               80, 21
               

               Conread position:
               187-359
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               61, 53
               

               Conread position:
               187-359
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               187-367
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               89, 13
               

               Conread position:
               190-356
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               86, 16
               

               Conread position:
               191-359
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               33, 150
               

               Conread position:
               201-373
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               201-375
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               201-502
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 135
               

               Conread position:
               203-359
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               16, 137
               

               Conread position:
               208-359
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               208-380
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               69, 12
               

               Conread position:
               208-388
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 12
               

               Conread position:
               208-401
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               9, 154
               

               Conread position:
               209-505
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               20, 136
               

               Conread position:
               217-353
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               59, 50
               

               Conread position:
               217-359
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               217-371
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               59, 100
               

               Conread position:
               217-376
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               59, 43
               

               Conread position:
               218-359
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               218-380
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               60, 119
               

               Conread position:
               221-359
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 7
               

               Conread position:
               221-503
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               56, 117
               

               Conread position:
               221-503
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               58, 140
               

               Conread position:
               222-393
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               242-503
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               253-503
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               79, 65
               

               Conread position:
               267-500
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               273-503
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               149, 30
               

               Conread position:
               277-501
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               299-503
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               111, 10
               
Show alignments to all cow chromosomes.