Cow genome map


           Conread name:
           Lym1-jns23_A07.f
        

               Conread position:
               1-348
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               90, 52
               

               Conread position:
               1-359
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               28, 53
               

               Conread position:
               14-359
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               72, 39
               

               Conread position:
               97-353
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 29
               

               Conread position:
               112-359
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               82, 37
               

               Conread position:
               121-359
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               53, 28
               

               Conread position:
               128-503
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               27, 75
               

               Conread position:
               130-359
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               18, 12
               

               Conread position:
               134-502
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               273
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               134-503
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               17, 188
               

               Conread position:
               142-342
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               134, 53
               

               Conread position:
               152-501
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               240
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               19, 30
               

               Conread position:
               155-384
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               51, 21
               

               Conread position:
               155-501
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               247
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               122, 85
               

               Conread position:
               155-503
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 21
               

               Conread position:
               156-373
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               38, 216
               

               Conread position:
               156-393
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 52
               

               Conread position:
               156-483
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               38, 61
               

               Conread position:
               156-497
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 66
               

               Conread position:
               156-503
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               253
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               32, 298
               

               Conread position:
               157-401
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               46, 183
               

               Conread position:
               167-502
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               43, 30
               

               Conread position:
               169-353
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               25, 33
               

               Conread position:
               177-507
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               240
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               17, 28
               

               Conread position:
               182-401
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               96, 22
               

               Conread position:
               185-359
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               185-359
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               185-359
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 36
               

               Conread position:
               186-460
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               17, 83
               

               Conread position:
               201-503
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               13, 68
               

               Conread position:
               203-401
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               75, 17
               

               Conread position:
               204-471
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 8
               

               Conread position:
               208-373
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 87
               

               Conread position:
               208-375
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               50, 12
               

               Conread position:
               208-503
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               56, 135
               

               Conread position:
               217-359
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               12, 51
               

               Conread position:
               217-383
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               59, 152
               

               Conread position:
               217-385
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               59, 135
               

               Conread position:
               221-373
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               55, 116
               

               Conread position:
               221-497
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               42, 122
               

               Conread position:
               222-371
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               54, 15
               

               Conread position:
               236-365
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 103
               

               Conread position:
               236-502
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               36, 156
               

               Conread position:
               236-509
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 55
               

               Conread position:
               238-472
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 18
               

               Conread position:
               238-503
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               29, 101
               

               Conread position:
               255-381
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               257-502
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               261-489
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               332-502
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               26, 32
               
Show alignments to all cow chromosomes.