Cow genome map


           Conread name:
           Lym1-jns23_A07.f
        

               Conread position:
               1-359
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 13
               

               Conread position:
               2-500
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 15
               

               Conread position:
               37-375
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               86, 16
               

               Conread position:
               53-342
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 264
               

               Conread position:
               63-502
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 66
               

               Conread position:
               78-346
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               13, 99
               

               Conread position:
               91-371
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               5, 62
               

               Conread position:
               97-493
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               47, 24
               

               Conread position:
               99-359
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 45
               

               Conread position:
               113-501
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               120-359
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 43
               

               Conread position:
               125-367
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               132-369
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               133-359
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               61, 21
               

               Conread position:
               133-373
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 18
               

               Conread position:
               133-502
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               272
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               70, 100
               

               Conread position:
               134-387
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               134-503
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 137
               

               Conread position:
               136-359
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               57, 19
               

               Conread position:
               139-502
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               141-401
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 8
               

               Conread position:
               142-359
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               52, 13
               

               Conread position:
               142-364
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               70, 195
               

               Conread position:
               142-501
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               258
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               80, 32
               

               Conread position:
               143-357
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               143-459
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 70
               

               Conread position:
               144-359
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               50, 114
               

               Conread position:
               144-502
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               258
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               60, 16
               

               Conread position:
               144-502
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               50, 99
               

               Conread position:
               154-386
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               154-502
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               40, 44
               

               Conread position:
               155-359
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 46
               

               Conread position:
               155-362
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               40, 149
               

               Conread position:
               155-367
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               48, 34
               

               Conread position:
               155-369
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               155-372
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               155-410
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               112, 50
               

               Conread position:
               156-339
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               31, 48
               

               Conread position:
               156-502
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               60, 29
               

               Conread position:
               157-359
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               159-359
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               47, 76
               

               Conread position:
               163-373
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               163-502
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               104, 9
               

               Conread position:
               164-502
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               167-359
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               27, 19
               

               Conread position:
               167-371
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 56
               

               Conread position:
               167-502
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 48
               

               Conread position:
               168-414
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               26, 149
               

               Conread position:
               176-501
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               18, 66
               

               Conread position:
               177-501
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               42, 20
               

               Conread position:
               180-497
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               58, 17
               

               Conread position:
               182-393
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               86, 39
               

               Conread position:
               182-504
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               232
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               94, 38
               

               Conread position:
               183-503
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               14, 20
               

               Conread position:
               184-388
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               185-383
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 31
               

               Conread position:
               188-359
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 13
               

               Conread position:
               188-374
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 14
               

               Conread position:
               189-359
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               78, 19
               

               Conread position:
               190-503
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               13, 74
               

               Conread position:
               191-387
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               15, 127
               

               Conread position:
               192-503
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               75, 10
               

               Conread position:
               193-383
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               196-359
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               197-359
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               74, 108
               

               Conread position:
               198-501
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 9
               

               Conread position:
               201-369
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               66, 13
               

               Conread position:
               202-359
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               21, 136
               

               Conread position:
               203-489
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               74, 65
               

               Conread position:
               203-502
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               33, 137
               

               Conread position:
               204-401
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               59, 84
               

               Conread position:
               204-401
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               54, 16
               

               Conread position:
               204-410
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               157, 72
               

               Conread position:
               208-359
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 29
               

               Conread position:
               208-377
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               208-396
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               208-397
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               9, 33
               

               Conread position:
               208-503
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 18
               

               Conread position:
               208-503
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               9, 156
               

               Conread position:
               208-503
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               12, 101
               

               Conread position:
               210-359
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               217-386
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               52, 9
               

               Conread position:
               218-373
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               219-359
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               221-370
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               221-387
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               55, 19
               

               Conread position:
               221-389
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 114
               

               Conread position:
               221-402
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               222-391
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 35
               

               Conread position:
               222-401
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               49, 119
               

               Conread position:
               222-464
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               53, 93
               

               Conread position:
               236-384
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               236-461
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 213
               

               Conread position:
               242-378
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               242-502
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               231, 34
               

               Conread position:
               251-527
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 190
               

               Conread position:
               253-502
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 126
               

               Conread position:
               257-390
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               258-504
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               267-513
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               9, 258
               

               Conread position:
               303-493
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 179
               

               Conread position:
               303-503
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               114, 100
               
Show alignments to all cow chromosomes.