Cow genome map

Conread name: Lym1-jns23_A07.f

Conread position: 1-369
Cow position:
Alignm length: 386
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 54

Conread position: 1-375
Cow position:
Alignm length: 401
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 26

Conread position: 1-501
Cow position:
Alignm length: 516
Alignm identity: 342
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 26, 68

Conread position: 1-503
Cow position:
Alignm length: 542
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 54

Conread position: 3-381
Cow position:
Alignm length: 394
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 52

Conread position: 9-359
Cow position:
Alignm length: 362
Alignm identity: 247
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 20, 46

Conread position: 12-371
Cow position:
Alignm length: 373
Alignm identity: 255
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 15, 49

Conread position: 18-359
Cow position:
Alignm length: 360
Alignm identity: 239
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 36

Conread position: 33-350
Cow position:
Alignm length: 341
Alignm identity: 230
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 60, 20

Conread position: 92-501
Cow position:
Alignm length: 420
Alignm identity: 287
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 24, 32

Conread position: 97-358
Cow position:
Alignm length: 265
Alignm identity: 180
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 70, 39

Conread position: 97-359
Cow position:
Alignm length: 274
Alignm identity: 183
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 130

Conread position: 113-504
Cow position:
Alignm length: 401
Alignm identity: 270
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 16

Conread position: 121-500
Cow position:
Alignm length: 404
Alignm identity: 262
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 70, 47

Conread position: 123-345
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 25, 57

Conread position: 123-359
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 99

Conread position: 123-367
Cow position:
Alignm length: 254
Alignm identity: 170
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 83, 199

Conread position: 123-370
Cow position:
Alignm length: 251
Alignm identity: 168
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 22, 62

Conread position: 124-401
Cow position:
Alignm length: 287
Alignm identity: 194
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 12

Conread position: 129-367
Cow position:
Alignm length: 241
Alignm identity: 160
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 66

Conread position: 130-359
Cow position:
Alignm length: 233
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 135

Conread position: 133-371
Cow position:
Alignm length: 247
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 76

Conread position: 140-375
Cow position:
Alignm length: 245
Alignm identity: 167
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 142-367
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 17

Conread position: 142-406
Cow position:
Alignm length: 270
Alignm identity: 186
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 131, 13

Conread position: 142-502
Cow position:
Alignm length: 363
Alignm identity: 238
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 113, 36

Conread position: 143-372
Cow position:
Alignm length: 234
Alignm identity: 158
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 14, 48

Conread position: 143-500
Cow position:
Alignm length: 376
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 198

Conread position: 144-484
Cow position:
Alignm length: 356
Alignm identity: 243
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 50, 77

Conread position: 155-359
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 39, 63

Conread position: 155-359
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 48, 126

Conread position: 155-502
Cow position:
Alignm length: 361
Alignm identity: 259
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 35, 133

Conread position: 155-502
Cow position:
Alignm length: 366
Alignm identity: 242
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 29, 133

Conread position: 156-351
Cow position:
Alignm length: 204
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 25

Conread position: 156-359
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 60

Conread position: 156-359
Cow position:
Alignm length: 211
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 111, 49

Conread position: 156-406
Cow position:
Alignm length: 260
Alignm identity: 183
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 155

Conread position: 156-500
Cow position:
Alignm length: 348
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 38

Conread position: 156-503
Cow position:
Alignm length: 356
Alignm identity: 241
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 211

Conread position: 157-369
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 8

Conread position: 157-489
Cow position:
Alignm length: 340
Alignm identity: 236
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 37, 107

Conread position: 160-375
Cow position:
Alignm length: 217
Alignm identity: 152
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 124, 53

Conread position: 163-487
Cow position:
Alignm length: 339
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 8

Conread position: 165-502
Cow position:
Alignm length: 346
Alignm identity: 237
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 29, 113

Conread position: 167-502
Cow position:
Alignm length: 341
Alignm identity: 221
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 27, 18

Conread position: 168-512
Cow position:
Alignm length: 361
Alignm identity: 254
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 26, 47

Conread position: 175-472
Cow position:
Alignm length: 305
Alignm identity: 202
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 52, 39

Conread position: 178-401
Cow position:
Alignm length: 233
Alignm identity: 159
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 182-381
Cow position:
Alignm length: 203
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 12, 46

Conread position: 182-503
Cow position:
Alignm length: 327
Alignm identity: 218
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 244, 21

Conread position: 182-503
Cow position:
Alignm length: 332
Alignm identity: 220
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 22

Conread position: 184-470
Cow position:
Alignm length: 298
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 5, 19

Conread position: 186-356
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 187-501
Cow position:
Alignm length: 315
Alignm identity: 224
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 13, 0

Conread position: 188-355
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 32

Conread position: 188-384
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 190-359
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 68

Conread position: 190-501
Cow position:
Alignm length: 321
Alignm identity: 210
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 126

Conread position: 193-359
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 11

Conread position: 195-359
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 196-502
Cow position:
Alignm length: 309
Alignm identity: 219
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 81, 21

Conread position: 196-503
Cow position:
Alignm length: 310
Alignm identity: 205
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 165

Conread position: 201-357
Cow position:
Alignm length: 160
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 201-424
Cow position:
Alignm length: 238
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 7, 0

Conread position: 202-359
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 18, 27

Conread position: 203-358
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 9

Conread position: 203-381
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 24, 134

Conread position: 204-504
Cow position:
Alignm length: 304
Alignm identity: 214
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 222, 57

Conread position: 208-373
Cow position:
Alignm length: 168
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 208-502
Cow position:
Alignm length: 304
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 9

Conread position: 208-502
Cow position:
Alignm length: 313
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 0

Conread position: 208-513
Cow position:
Alignm length: 309
Alignm identity: 202
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 69, 148

Conread position: 212-359
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 108

Conread position: 214-503
Cow position:
Alignm length: 296
Alignm identity: 216
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 53, 110

Conread position: 215-402
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 216-407
Cow position:
Alignm length: 198
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 216-433
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 32

Conread position: 216-502
Cow position:
Alignm length: 293
Alignm identity: 201
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 7, 149

Conread position: 216-503
Cow position:
Alignm length: 303
Alignm identity: 205
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 217-381
Cow position:
Alignm length: 166
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 217-405
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 51, 63

Conread position: 218-385
Cow position:
Alignm length: 170
Alignm identity: 125
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 50, 112

Conread position: 218-406
Cow position:
Alignm length: 192
Alignm identity: 145
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 58, 107

Conread position: 218-502
Cow position:
Alignm length: 295
Alignm identity: 209
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 52, 142

Conread position: 221-379
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 221-383
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 56, 116

Conread position: 221-391
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 56, 41

Conread position: 221-502
Cow position:
Alignm length: 286
Alignm identity: 199
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 32

Conread position: 221-503
Cow position:
Alignm length: 290
Alignm identity: 197
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 28

Conread position: 221-526
Cow position:
Alignm length: 311
Alignm identity: 217
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 49, 150

Conread position: 222-407
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 55, 115

Conread position: 222-460
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 58, 27

Conread position: 222-502
Cow position:
Alignm length: 283
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 45

Conread position: 222-508
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 111, 151

Conread position: 223-503
Cow position:
Alignm length: 289
Alignm identity: 202
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 44, 184

Conread position: 229-517
Cow position:
Alignm length: 294
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 120

Conread position: 232-380
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 237-391
Cow position:
Alignm length: 162
Alignm identity: 132
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 242-497
Cow position:
Alignm length: 271
Alignm identity: 204
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 29, 0

Conread position: 245-359
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 248-503
Cow position:
Alignm length: 265
Alignm identity: 189
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 73

Conread position: 255-512
Cow position:
Alignm length: 265
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 256-401
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 256-503
Cow position:
Alignm length: 252
Alignm identity: 175
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 20, 81

Conread position: 259-401
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 78

Conread position: 262-478
Cow position:
Alignm length: 222
Alignm identity: 156
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 14, 136

Conread position: 263-442
Cow position:
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 74

Conread position: 269-502
Cow position:
Alignm length: 248
Alignm identity: 189
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 16, 0

Conread position: 275-502
Cow position:
Alignm length: 234
Alignm identity: 166
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 151, 80

Conread position: 304-502
Cow position:
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 155, 24

Conread position: 309-524
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 95, 107

Show alignments to all cow chromosomes.