Cow genome map

Conread name: Lym1-jns23_A07.f

Conread position: 1-321
Cow position:
Alignm length: 359
Alignm identity: 240
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 54

Conread position: 1-359
Cow position:
Alignm length: 392
Alignm identity: 268
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 13

Conread position: 1-503
Cow position:
Alignm length: 517
Alignm identity: 355
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 28, 48

Conread position: 2-369
Cow position:
Alignm length: 401
Alignm identity: 269
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 26

Conread position: 3-341
Cow position:
Alignm length: 348
Alignm identity: 247
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 13, 51

Conread position: 3-365
Cow position:
Alignm length: 374
Alignm identity: 255
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 80, 43

Conread position: 13-221
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 12

Conread position: 25-359
Cow position:
Alignm length: 355
Alignm identity: 244
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 66, 28

Conread position: 34-358
Cow position:
Alignm length: 349
Alignm identity: 232
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 57, 27

Conread position: 34-501
Cow position:
Alignm length: 483
Alignm identity: 323
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 60, 19

Conread position: 40-358
Cow position:
Alignm length: 342
Alignm identity: 228
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 48, 13

Conread position: 68-367
Cow position:
Alignm length: 306
Alignm identity: 201
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 84

Conread position: 107-467
Cow position:
Alignm length: 374
Alignm identity: 244
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 38, 94

Conread position: 109-516
Cow position:
Alignm length: 419
Alignm identity: 286
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 8

Conread position: 112-383
Cow position:
Alignm length: 284
Alignm identity: 195
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 12, 0

Conread position: 115-415
Cow position:
Alignm length: 313
Alignm identity: 214
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 71, 0

Conread position: 124-368
Cow position:
Alignm length: 251
Alignm identity: 164
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 31

Conread position: 129-502
Cow position:
Alignm length: 383
Alignm identity: 252
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 43

Conread position: 131-359
Cow position:
Alignm length: 237
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 150

Conread position: 131-387
Cow position:
Alignm length: 264
Alignm identity: 177
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 25, 79

Conread position: 133-472
Cow position:
Alignm length: 357
Alignm identity: 249
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 24, 90

Conread position: 133-503
Cow position:
Alignm length: 394
Alignm identity: 260
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 70, 211

Conread position: 136-480
Cow position:
Alignm length: 354
Alignm identity: 237
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 16

Conread position: 138-502
Cow position:
Alignm length: 388
Alignm identity: 255
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 129, 69

Conread position: 142-357
Cow position:
Alignm length: 221
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 93

Conread position: 142-359
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 81, 34

Conread position: 142-367
Cow position:
Alignm length: 235
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 142-472
Cow position:
Alignm length: 339
Alignm identity: 229
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 29, 40

Conread position: 143-359
Cow position:
Alignm length: 227
Alignm identity: 156
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 102

Conread position: 143-359
Cow position:
Alignm length: 223
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 6

Conread position: 144-359
Cow position:
Alignm length: 226
Alignm identity: 154
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 50, 209

Conread position: 145-371
Cow position:
Alignm length: 232
Alignm identity: 154
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 149-405
Cow position:
Alignm length: 266
Alignm identity: 183
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 9, 65

Conread position: 155-358
Cow position:
Alignm length: 213
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 81

Conread position: 155-359
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 122, 52

Conread position: 155-367
Cow position:
Alignm length: 215
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 43

Conread position: 155-371
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 48, 76

Conread position: 155-373
Cow position:
Alignm length: 223
Alignm identity: 154
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 61, 22

Conread position: 155-386
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 136

Conread position: 155-530
Cow position:
Alignm length: 401
Alignm identity: 270
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 125

Conread position: 156-351
Cow position:
Alignm length: 197
Alignm identity: 134
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 178, 39

Conread position: 156-357
Cow position:
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 11

Conread position: 156-503
Cow position:
Alignm length: 350
Alignm identity: 252
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 38, 59

Conread position: 161-371
Cow position:
Alignm length: 217
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 45, 10

Conread position: 162-370
Cow position:
Alignm length: 212
Alignm identity: 161
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 9, 20

Conread position: 162-379
Cow position:
Alignm length: 218
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 163-371
Cow position:
Alignm length: 211
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 114, 8

Conread position: 167-359
Cow position:
Alignm length: 200
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 167-395
Cow position:
Alignm length: 233
Alignm identity: 161
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 30

Conread position: 167-500
Cow position:
Alignm length: 346
Alignm identity: 234
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 27, 50

Conread position: 167-528
Cow position:
Alignm length: 381
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 37

Conread position: 168-359
Cow position:
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 51

Conread position: 168-502
Cow position:
Alignm length: 343
Alignm identity: 229
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 26, 49

Conread position: 169-358
Cow position:
Alignm length: 195
Alignm identity: 134
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 97, 43

Conread position: 178-359
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 30

Conread position: 181-387
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 32

Conread position: 182-367
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 8

Conread position: 183-502
Cow position:
Alignm length: 329
Alignm identity: 233
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 82, 21

Conread position: 184-358
Cow position:
Alignm length: 183
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 184-358
Cow position:
Alignm length: 176
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 19

Conread position: 185-502
Cow position:
Alignm length: 338
Alignm identity: 229
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 18, 97

Conread position: 188-359
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 188-359
Cow position:
Alignm length: 173
Alignm identity: 120
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 90, 11

Conread position: 188-385
Cow position:
Alignm length: 200
Alignm identity: 140
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 45

Conread position: 188-510
Cow position:
Alignm length: 334
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 156

Conread position: 189-370
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 78, 31

Conread position: 190-377
Cow position:
Alignm length: 195
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 197-372
Cow position:
Alignm length: 180
Alignm identity: 131
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 65, 19

Conread position: 200-502
Cow position:
Alignm length: 318
Alignm identity: 226
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 41, 33

Conread position: 201-502
Cow position:
Alignm length: 310
Alignm identity: 213
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 74, 16

Conread position: 203-371
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 73, 16

Conread position: 203-373
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 51

Conread position: 203-502
Cow position:
Alignm length: 313
Alignm identity: 207
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 206, 17

Conread position: 203-503
Cow position:
Alignm length: 316
Alignm identity: 224
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 74, 16

Conread position: 204-359
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 204-372
Cow position:
Alignm length: 175
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 208-359
Cow position:
Alignm length: 154
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 208-371
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 45

Conread position: 208-456
Cow position:
Alignm length: 259
Alignm identity: 178
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 208-476
Cow position:
Alignm length: 275
Alignm identity: 189
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 15, 107

Conread position: 208-502
Cow position:
Alignm length: 305
Alignm identity: 217
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 68, 105

Conread position: 209-359
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 67, 5

Conread position: 209-502
Cow position:
Alignm length: 302
Alignm identity: 204
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 58, 133

Conread position: 210-367
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 210-369
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 7

Conread position: 212-458
Cow position:
Alignm length: 249
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 145

Conread position: 214-359
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 123

Conread position: 214-379
Cow position:
Alignm length: 167
Alignm identity: 118
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 49

Conread position: 216-503
Cow position:
Alignm length: 304
Alignm identity: 220
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 59, 0

Conread position: 219-502
Cow position:
Alignm length: 287
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 7

Conread position: 220-379
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 121

Conread position: 220-388
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 120

Conread position: 220-401
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 50, 0

Conread position: 221-358
Cow position:
Alignm length: 140
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 221-367
Cow position:
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 7

Conread position: 221-369
Cow position:
Alignm length: 150
Alignm identity: 110
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 56, 94

Conread position: 221-373
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 221-389
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 221-391
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 17, 118

Conread position: 221-429
Cow position:
Alignm length: 212
Alignm identity: 153
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 55, 113

Conread position: 221-526
Cow position:
Alignm length: 313
Alignm identity: 208
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 46, 161

Conread position: 222-389
Cow position:
Alignm length: 170
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 166

Conread position: 222-501
Cow position:
Alignm length: 286
Alignm identity: 207
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 54, 92

Conread position: 222-502
Cow position:
Alignm length: 290
Alignm identity: 199
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 179

Conread position: 222-506
Cow position:
Alignm length: 295
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 143

Conread position: 223-373
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 31, 0

Conread position: 223-502
Cow position:
Alignm length: 284
Alignm identity: 196
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 205, 37

Conread position: 235-512
Cow position:
Alignm length: 299
Alignm identity: 211
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 103, 35

Conread position: 236-502
Cow position:
Alignm length: 277
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 69

Conread position: 236-503
Cow position:
Alignm length: 271
Alignm identity: 186
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 42, 154

Conread position: 237-526
Cow position:
Alignm length: 292
Alignm identity: 192
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 39, 167

Conread position: 240-424
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 36, 76

Conread position: 247-375
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 250-502
Cow position:
Alignm length: 265
Alignm identity: 188
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 253-502
Cow position:
Alignm length: 261
Alignm identity: 187
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 24, 0

Conread position: 253-503
Cow position:
Alignm length: 253
Alignm identity: 178
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 24, 109

Conread position: 257-497
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 242

Conread position: 273-480
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 132, 61

Conread position: 276-503
Cow position:
Alignm length: 235
Alignm identity: 155
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 108, 0

Conread position: 278-401
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 337-502
Cow position:
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 64

Show alignments to all cow chromosomes.