Cow genome map


           Conread name:
           Lym1-jns23_A07.f
        

               Conread position:
               1-399
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 54
               

               Conread position:
               11-313
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               80, 18
               

               Conread position:
               32-358
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               52, 21
               

               Conread position:
               84-359
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               78, 275
               

               Conread position:
               85-350
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               25, 21
               

               Conread position:
               85-357
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               59, 270
               

               Conread position:
               85-422
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               47, 32
               

               Conread position:
               96-415
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               46, 21
               

               Conread position:
               97-406
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 37
               

               Conread position:
               109-353
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               48, 23
               

               Conread position:
               113-503
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 10
               

               Conread position:
               124-504
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               130-359
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 11
               

               Conread position:
               130-380
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               26, 207
               

               Conread position:
               131-359
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 161
               

               Conread position:
               131-367
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               131-381
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               20, 25
               

               Conread position:
               132-371
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               133-358
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               26, 120
               

               Conread position:
               133-373
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 23
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               144-502
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               11, 5
               

               Conread position:
               155-359
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               39, 186
               

               Conread position:
               155-502
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               39, 195
               

               Conread position:
               155-507
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               252
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               54, 40
               

               Conread position:
               156-349
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 11
               

               Conread position:
               156-359
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               156-373
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               38, 196
               

               Conread position:
               156-511
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               38, 46
               

               Conread position:
               157-354
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               112, 8
               

               Conread position:
               157-359
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               46, 38
               

               Conread position:
               159-406
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               45, 68
               

               Conread position:
               160-503
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               34, 155
               

               Conread position:
               162-367
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               46, 9
               

               Conread position:
               162-370
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               115, 9
               

               Conread position:
               162-431
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               9, 20
               

               Conread position:
               162-518
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               164-454
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               66, 31
               

               Conread position:
               167-384
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               95, 18
               

               Conread position:
               167-456
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               27, 5
               

               Conread position:
               167-502
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               27, 31
               

               Conread position:
               168-374
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 83
               

               Conread position:
               170-359
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 39
               

               Conread position:
               170-506
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               24, 228
               

               Conread position:
               182-359
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               86, 32
               

               Conread position:
               182-372
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               27, 154
               

               Conread position:
               188-379
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               188-503
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               60, 11
               

               Conread position:
               190-359
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               86, 36
               

               Conread position:
               193-359
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               24, 145
               

               Conread position:
               194-366
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               73, 26
               

               Conread position:
               194-455
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               30, 143
               

               Conread position:
               201-352
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 55
               

               Conread position:
               203-395
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               119, 16
               

               Conread position:
               203-438
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               74, 226
               

               Conread position:
               203-502
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               204-502
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               72, 150
               

               Conread position:
               205-357
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               208-367
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               18, 60
               

               Conread position:
               208-373
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               68, 5
               

               Conread position:
               208-391
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               214-396
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               217-369
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               217-502
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               52, 233
               

               Conread position:
               217-503
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               17, 125
               

               Conread position:
               217-503
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               20, 15
               

               Conread position:
               219-379
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               220-501
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               56, 156
               

               Conread position:
               221-359
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               221-359
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               55, 114
               

               Conread position:
               221-373
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               55, 49
               

               Conread position:
               221-379
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               221-401
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               221-502
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               25, 144
               

               Conread position:
               221-503
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               55, 116
               

               Conread position:
               221-503
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 146
               

               Conread position:
               222-371
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               230-359
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 109
               

               Conread position:
               234-372
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               42, 103
               

               Conread position:
               235-472
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               33, 105
               

               Conread position:
               239-381
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 102
               

               Conread position:
               249-503
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               111, 29
               

               Conread position:
               250-502
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               259-418
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               17, 70
               

               Conread position:
               275-385
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               277-503
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               197, 32
               

               Conread position:
               337-503
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               24, 0
               
Show alignments to all cow chromosomes.