Cow genome map
Conread name: | Lym1-jns23_A07.f |
Conread position: | 1-399 |
Cow position: | chr9:9324839-9325264 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 54 |
Conread position: | 11-313 |
Cow position: | chr9:64024116-64024430 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 219 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 80, 18 |
Conread position: | 32-358 |
Cow position: | chr9:12322116-12321779 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 229 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 52, 21 |
Conread position: | 84-359 |
Cow position: | chr9:52409468-52409173 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 207 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 78, 275 |
Conread position: | 85-350 |
Cow position: | chr9:47547748-47547481 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 181 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 25, 21 |
Conread position: | 85-357 |
Cow position: | chr9:33847083-33846795 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 204 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 59, 270 |
Conread position: | 85-422 |
Cow position: | chr9:34762843-34762509 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 233 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 47, 32 |
Conread position: | 96-415 |
Cow position: | chr9:52578523-52578195 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 225 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 46, 21 |
Conread position: | 97-406 |
Cow position: | chr9:51311685-51311997 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 214 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 13, 37 |
Conread position: | 109-353 |
Cow position: | chr9:4285236-4284998 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 173 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 48, 23 |
Conread position: | 113-503 |
Cow position: | chr9:41781928-41782340 (view UCSC Genome Browser custom track) |
Alignm length: | 414 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 10 |
Conread position: | 124-504 |
Cow position: | chr9:8779192-8778800 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 17 |
Conread position: | 130-359 |
Cow position: | chr9:11146605-11146373 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 158 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 26, 11 |
Conread position: | 130-380 |
Cow position: | chr9:3722824-3722565 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 186 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 26, 207 |
Conread position: | 131-359 |
Cow position: | chr9:5141128-5141356 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 162 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 26, 161 |
Conread position: | 131-367 |
Cow position: | chr9:34310076-34310324 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 168 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 131-381 |
Cow position: | chr9:21674941-21674681 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 193 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 20, 25 |
Conread position: | 132-371 |
Cow position: | chr9:60459239-60459468 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 162 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 133-358 |
Cow position: | chr9:20839665-20839897 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 157 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 26, 120 |
Conread position: | 133-373 |
Cow position: | chr9:19382381-19382618 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 161 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 18, 23 |
Conread position: | 141-372 |
Cow position: | chr9:64091745-64091984 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 160 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 144-502 |
Cow position: | chr9:44408105-44408461 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 236 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 11, 5 |
Conread position: | 155-359 |
Cow position: | chr9:3724988-3724780 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 147 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 39, 186 |
Conread position: | 155-502 |
Cow position: | chr9:34093360-34093008 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 240 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 39, 195 |
Conread position: | 155-507 |
Cow position: | chr9:14961025-14961382 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 252 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 54, 40 |
Conread position: | 156-349 |
Cow position: | chr9:9200647-9200453 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 140 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 47, 11 |
Conread position: | 156-359 |
Cow position: | chr9:5621959-5621748 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 149 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 156-373 |
Cow position: | chr9:32396019-32396239 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 156 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 38, 196 |
Conread position: | 156-511 |
Cow position: | chr9:8950982-8951327 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 246 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 38, 46 |
Conread position: | 157-354 |
Cow position: | chr9:26828741-26828544 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 142 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 112, 8 |
Conread position: | 157-359 |
Cow position: | chr9:12355934-12356138 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 145 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 46, 38 |
Conread position: | 159-406 |
Cow position: | chr9:9416322-9416079 (view UCSC Genome Browser custom track) |
Alignm length: | 250 |
Alignm identity: | 164 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 45, 68 |
Conread position: | 160-503 |
Cow position: | chr9:16745755-16746120 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 257 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 34, 155 |
Conread position: | 162-367 |
Cow position: | chr9:55084207-55084007 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 144 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 46, 9 |
Conread position: | 162-370 |
Cow position: | chr9:3070330-3070130 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 147 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 115, 9 |
Conread position: | 162-431 |
Cow position: | chr9:47875866-47875593 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 196 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 9, 20 |
Conread position: | 162-518 |
Cow position: | chr9:41317881-41317533 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 247 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 9, 53 |
Conread position: | 164-454 |
Cow position: | chr9:24850326-24850623 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 206 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 66, 31 |
Conread position: | 167-384 |
Cow position: | chr9:38692448-38692231 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 158 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 95, 18 |
Conread position: | 167-456 |
Cow position: | chr9:36999973-36999678 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 205 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 27, 5 |
Conread position: | 167-502 |
Cow position: | chr9:10761263-10760917 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 242 |
Alignm E-value: | 7e-39 |
Alignm gaps (pig, cow): | 27, 31 |
Conread position: | 168-374 |
Cow position: | chr9:35368965-35369177 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 146 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 26, 83 |
Conread position: | 170-359 |
Cow position: | chr9:8099730-8099540 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 139 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 25, 39 |
Conread position: | 170-506 |
Cow position: | chr9:41958710-41958378 (view UCSC Genome Browser custom track) |
Alignm length: | 347 |
Alignm identity: | 232 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 24, 228 |
Conread position: | 182-359 |
Cow position: | chr9:54924729-54924908 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 129 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 86, 32 |
Conread position: | 182-372 |
Cow position: | chr9:5340736-5340927 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 131 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 27, 154 |
Conread position: | 188-379 |
Cow position: | chr9:35100975-35101169 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 137 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 188-503 |
Cow position: | chr9:58673848-58674159 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 223 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 60, 11 |
Conread position: | 190-359 |
Cow position: | chr9:5029628-5029797 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 123 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 86, 36 |
Conread position: | 193-359 |
Cow position: | chr9:35850013-35850180 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 119 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 24, 145 |
Conread position: | 194-366 |
Cow position: | chr9:3216322-3216494 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 135 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 73, 26 |
Conread position: | 194-455 |
Cow position: | chr9:3582830-3582565 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 191 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 30, 143 |
Conread position: | 201-352 |
Cow position: | chr9:28706079-28705928 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 119 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 26, 55 |
Conread position: | 203-395 |
Cow position: | chr9:49403881-49404072 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 141 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 119, 16 |
Conread position: | 203-438 |
Cow position: | chr9:33940732-33940970 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 157 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 74, 226 |
Conread position: | 203-502 |
Cow position: | chr9:37069442-37069148 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 214 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 74, 17 |
Conread position: | 204-502 |
Cow position: | chr9:44552873-44553173 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 201 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 72, 150 |
Conread position: | 205-357 |
Cow position: | chr9:18002822-18002669 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 110 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 208-367 |
Cow position: | chr9:24886491-24886333 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 117 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 18, 60 |
Conread position: | 208-373 |
Cow position: | chr9:11155637-11155801 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 118 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 68, 5 |
Conread position: | 208-391 |
Cow position: | chr9:49764785-49764970 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 135 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 214-396 |
Cow position: | chr9:11743753-11743940 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 138 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 217-369 |
Cow position: | chr9:9556448-9556600 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 116 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 18, 33 |
Conread position: | 217-502 |
Cow position: | chr9:5518511-5518213 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 210 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 52, 233 |
Conread position: | 217-503 |
Cow position: | chr9:30020113-30020401 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 209 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 17, 125 |
Conread position: | 217-503 |
Cow position: | chr9:34400173-34400474 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 206 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 20, 15 |
Conread position: | 219-379 |
Cow position: | chr9:10118524-10118360 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 118 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 220-501 |
Cow position: | chr9:26099479-26099745 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 198 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 56, 156 |
Conread position: | 221-359 |
Cow position: | chr9:52787394-52787254 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 111 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 221-359 |
Cow position: | chr9:55262436-55262301 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 110 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 55, 114 |
Conread position: | 221-373 |
Cow position: | chr9:27449477-27449629 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 114 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 55, 49 |
Conread position: | 221-379 |
Cow position: | chr9:24904619-24904779 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 119 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 221-401 |
Cow position: | chr9:15054020-15054202 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 139 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 221-502 |
Cow position: | chr9:8600476-8600758 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 197 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 25, 144 |
Conread position: | 221-503 |
Cow position: | chr9:5399862-5400167 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 219 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 55, 116 |
Conread position: | 221-503 |
Cow position: | chr9:40060188-40059900 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 215 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 146 |
Conread position: | 222-371 |
Cow position: | chr9:36586675-36586525 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 111 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 230-359 |
Cow position: | chr9:33100989-33100860 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 103 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 38, 109 |
Conread position: | 234-372 |
Cow position: | chr9:2205902-2205764 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 105 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 42, 103 |
Conread position: | 235-472 |
Cow position: | chr9:9368800-9368570 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 173 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 33, 105 |
Conread position: | 239-381 |
Cow position: | chr9:51744305-51744161 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 110 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 29, 102 |
Conread position: | 249-503 |
Cow position: | chr9:20579447-20579191 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 193 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 111, 29 |
Conread position: | 250-502 |
Cow position: | chr9:19067971-19068227 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 175 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 27, 7 |
Conread position: | 259-418 |
Cow position: | chr9:27292063-27291907 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 127 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 17, 70 |
Conread position: | 275-385 |
Cow position: | chr9:47836846-47836736 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 89 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 277-503 |
Cow position: | chr9:3844875-3844662 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 167 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 197, 32 |
Conread position: | 337-503 |
Cow position: | chr9:32688537-32688366 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 135 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.