Cow genome map

Conread name: Lym1-jns23_A07.f

Conread position: 1-353
Cow position:
Alignm length: 363
Alignm identity: 256
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 28, 63

Conread position: 1-357
Cow position:
Alignm length: 366
Alignm identity: 254
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 88, 52

Conread position: 2-153
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 26

Conread position: 2-359
Cow position:
Alignm length: 379
Alignm identity: 248
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 53

Conread position: 2-381
Cow position:
Alignm length: 393
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 60

Conread position: 7-291
Cow position:
Alignm length: 290
Alignm identity: 207
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 26, 48

Conread position: 8-384
Cow position:
Alignm length: 396
Alignm identity: 275
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 83, 17

Conread position: 9-367
Cow position:
Alignm length: 383
Alignm identity: 266
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 79, 16

Conread position: 17-502
Cow position:
Alignm length: 504
Alignm identity: 331
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 39

Conread position: 32-359
Cow position:
Alignm length: 352
Alignm identity: 241
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 80, 21

Conread position: 33-341
Cow position:
Alignm length: 336
Alignm identity: 230
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 7, 21

Conread position: 33-393
Cow position:
Alignm length: 375
Alignm identity: 256
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 144, 27

Conread position: 35-315
Cow position:
Alignm length: 298
Alignm identity: 200
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 117, 18

Conread position: 89-503
Cow position:
Alignm length: 434
Alignm identity: 291
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 60, 99

Conread position: 91-502
Cow position:
Alignm length: 429
Alignm identity: 287
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 7, 52

Conread position: 97-359
Cow position:
Alignm length: 271
Alignm identity: 180
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 16, 170

Conread position: 97-383
Cow position:
Alignm length: 293
Alignm identity: 192
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 234

Conread position: 97-502
Cow position:
Alignm length: 420
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 50

Conread position: 103-375
Cow position:
Alignm length: 291
Alignm identity: 203
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 40, 20

Conread position: 107-359
Cow position:
Alignm length: 254
Alignm identity: 173
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 169, 13

Conread position: 109-359
Cow position:
Alignm length: 260
Alignm identity: 176
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 35

Conread position: 112-357
Cow position:
Alignm length: 253
Alignm identity: 170
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 91, 30

Conread position: 113-504
Cow position:
Alignm length: 400
Alignm identity: 275
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 20, 10

Conread position: 115-500
Cow position:
Alignm length: 397
Alignm identity: 253
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 105, 222

Conread position: 123-501
Cow position:
Alignm length: 401
Alignm identity: 273
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 76, 23

Conread position: 127-344
Cow position:
Alignm length: 219
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 28, 54

Conread position: 127-358
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 67, 19

Conread position: 127-502
Cow position:
Alignm length: 388
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 10

Conread position: 129-373
Cow position:
Alignm length: 253
Alignm identity: 172
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 32

Conread position: 129-503
Cow position:
Alignm length: 400
Alignm identity: 267
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 16

Conread position: 130-359
Cow position:
Alignm length: 242
Alignm identity: 163
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 132-381
Cow position:
Alignm length: 258
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 27, 42

Conread position: 133-372
Cow position:
Alignm length: 249
Alignm identity: 168
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 66

Conread position: 133-377
Cow position:
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 211

Conread position: 133-502
Cow position:
Alignm length: 393
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 18

Conread position: 133-527
Cow position:
Alignm length: 401
Alignm identity: 274
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 61, 85

Conread position: 135-367
Cow position:
Alignm length: 243
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 14

Conread position: 141-377
Cow position:
Alignm length: 243
Alignm identity: 172
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 8

Conread position: 141-407
Cow position:
Alignm length: 275
Alignm identity: 182
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 142-383
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 15, 7

Conread position: 142-503
Cow position:
Alignm length: 379
Alignm identity: 261
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 64, 97

Conread position: 143-500
Cow position:
Alignm length: 374
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 6

Conread position: 144-356
Cow position:
Alignm length: 220
Alignm identity: 149
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 154-359
Cow position:
Alignm length: 210
Alignm identity: 158
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 48, 65

Conread position: 154-372
Cow position:
Alignm length: 223
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 154-375
Cow position:
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 185

Conread position: 155-350
Cow position:
Alignm length: 197
Alignm identity: 134
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 39, 43

Conread position: 155-357
Cow position:
Alignm length: 209
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 155-359
Cow position:
Alignm length: 207
Alignm identity: 139
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 39, 126

Conread position: 155-370
Cow position:
Alignm length: 223
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 22

Conread position: 155-373
Cow position:
Alignm length: 223
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 101

Conread position: 155-379
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 167

Conread position: 155-454
Cow position:
Alignm length: 308
Alignm identity: 213
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 39, 20

Conread position: 155-472
Cow position:
Alignm length: 327
Alignm identity: 212
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 39

Conread position: 156-358
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 156-359
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 38

Conread position: 156-401
Cow position:
Alignm length: 255
Alignm identity: 169
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 183

Conread position: 160-359
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 148

Conread position: 162-373
Cow position:
Alignm length: 213
Alignm identity: 144
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 9

Conread position: 162-377
Cow position:
Alignm length: 218
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 115, 9

Conread position: 162-406
Cow position:
Alignm length: 246
Alignm identity: 173
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 115, 9

Conread position: 162-502
Cow position:
Alignm length: 350
Alignm identity: 243
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 54, 10

Conread position: 162-503
Cow position:
Alignm length: 349
Alignm identity: 246
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 115, 9

Conread position: 164-471
Cow position:
Alignm length: 317
Alignm identity: 225
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 113, 7

Conread position: 167-353
Cow position:
Alignm length: 189
Alignm identity: 137
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 27, 55

Conread position: 167-359
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 14

Conread position: 167-482
Cow position:
Alignm length: 338
Alignm identity: 226
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 27, 113

Conread position: 168-373
Cow position:
Alignm length: 208
Alignm identity: 142
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 170

Conread position: 172-383
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 14, 167

Conread position: 179-503
Cow position:
Alignm length: 347
Alignm identity: 238
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 24

Conread position: 180-500
Cow position:
Alignm length: 331
Alignm identity: 222
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 14

Conread position: 181-373
Cow position:
Alignm length: 199
Alignm identity: 140
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 86, 31

Conread position: 182-359
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 85, 21

Conread position: 182-373
Cow position:
Alignm length: 198
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 182-502
Cow position:
Alignm length: 333
Alignm identity: 230
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 12, 40

Conread position: 186-367
Cow position:
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 158

Conread position: 188-359
Cow position:
Alignm length: 173
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 89, 15

Conread position: 188-373
Cow position:
Alignm length: 188
Alignm identity: 133
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 88, 8

Conread position: 189-353
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 19

Conread position: 190-359
Cow position:
Alignm length: 175
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 193-502
Cow position:
Alignm length: 320
Alignm identity: 214
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 227

Conread position: 193-503
Cow position:
Alignm length: 321
Alignm identity: 225
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 71, 215

Conread position: 194-503
Cow position:
Alignm length: 320
Alignm identity: 217
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 194

Conread position: 195-502
Cow position:
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 212

Conread position: 195-504
Cow position:
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 203

Conread position: 196-501
Cow position:
Alignm length: 312
Alignm identity: 206
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 30

Conread position: 197-406
Cow position:
Alignm length: 218
Alignm identity: 163
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 23, 147

Conread position: 200-501
Cow position:
Alignm length: 312
Alignm identity: 219
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 25, 49

Conread position: 201-502
Cow position:
Alignm length: 304
Alignm identity: 212
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 212, 46

Conread position: 201-502
Cow position:
Alignm length: 309
Alignm identity: 211
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 24, 214

Conread position: 202-359
Cow position:
Alignm length: 167
Alignm identity: 125
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 6, 108

Conread position: 203-359
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 74, 17

Conread position: 203-373
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 54, 16

Conread position: 203-391
Cow position:
Alignm length: 190
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 74, 166

Conread position: 203-401
Cow position:
Alignm length: 203
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 23

Conread position: 203-502
Cow position:
Alignm length: 301
Alignm identity: 201
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 271, 23

Conread position: 203-502
Cow position:
Alignm length: 306
Alignm identity: 210
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 74, 25

Conread position: 208-365
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 208-381
Cow position:
Alignm length: 175
Alignm identity: 124
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 69, 43

Conread position: 208-490
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 9, 25

Conread position: 208-503
Cow position:
Alignm length: 303
Alignm identity: 217
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 15, 122

Conread position: 208-503
Cow position:
Alignm length: 301
Alignm identity: 206
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 69, 169

Conread position: 210-389
Cow position:
Alignm length: 182
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 210-497
Cow position:
Alignm length: 300
Alignm identity: 203
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 66, 166

Conread position: 212-358
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 141

Conread position: 214-502
Cow position:
Alignm length: 301
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 54

Conread position: 216-503
Cow position:
Alignm length: 290
Alignm identity: 193
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 183, 5

Conread position: 217-359
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 123

Conread position: 217-359
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 36

Conread position: 217-502
Cow position:
Alignm length: 295
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 59

Conread position: 217-503
Cow position:
Alignm length: 293
Alignm identity: 203
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 58, 167

Conread position: 217-504
Cow position:
Alignm length: 294
Alignm identity: 211
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 54, 149

Conread position: 218-359
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 221-359
Cow position:
Alignm length: 139
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 221-359
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 64

Conread position: 221-359
Cow position:
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 115

Conread position: 221-367
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 221-407
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 146

Conread position: 221-414
Cow position:
Alignm length: 195
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 91

Conread position: 221-502
Cow position:
Alignm length: 286
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 137, 52

Conread position: 221-502
Cow position:
Alignm length: 289
Alignm identity: 214
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 46, 182

Conread position: 221-502
Cow position:
Alignm length: 301
Alignm identity: 212
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 0

Conread position: 221-503
Cow position:
Alignm length: 291
Alignm identity: 210
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 46, 203

Conread position: 221-503
Cow position:
Alignm length: 291
Alignm identity: 207
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 46, 203

Conread position: 221-503
Cow position:
Alignm length: 285
Alignm identity: 194
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 48

Conread position: 221-520
Cow position:
Alignm length: 304
Alignm identity: 216
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 51, 135

Conread position: 222-353
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 222-356
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 222-379
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 222-407
Cow position:
Alignm length: 192
Alignm identity: 134
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 45, 118

Conread position: 228-373
Cow position:
Alignm length: 149
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 33

Conread position: 228-458
Cow position:
Alignm length: 244
Alignm identity: 172
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 8, 82

Conread position: 228-502
Cow position:
Alignm length: 278
Alignm identity: 187
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 49, 157

Conread position: 255-502
Cow position:
Alignm length: 250
Alignm identity: 168
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 103

Conread position: 255-502
Cow position:
Alignm length: 252
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 41

Conread position: 258-502
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 20, 104

Conread position: 261-467
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 261-503
Cow position:
Alignm length: 261
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 230

Conread position: 288-503
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 48, 122

Conread position: 290-502
Cow position:
Alignm length: 214
Alignm identity: 162
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 184, 46

Show alignments to all cow chromosomes.