Cow genome map
| Conread name: | Lym1-jns23_A07.f |
| Conread position: | 1-353 |
| Cow position: | chrX:3395631-3395981 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 256 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 28, 63 |
| Conread position: | 1-357 |
| Cow position: | chrX:27069755-27070107 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 254 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 88, 52 |
| Conread position: | 2-153 |
| Cow position: | chrX:37299766-37299617 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 87, 26 |
| Conread position: | 2-359 |
| Cow position: | chrX:30763273-30763646 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 53 |
| Conread position: | 2-381 |
| Cow position: | chrX:26880744-26880362 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 60 |
| Conread position: | 7-291 |
| Cow position: | chrX:19438023-19437742 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 26, 48 |
| Conread position: | 8-384 |
| Cow position: | chrX:40540005-40540393 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 275 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 83, 17 |
| Conread position: | 9-367 |
| Cow position: | chrX:14909157-14908782 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 266 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 79, 16 |
| Conread position: | 17-502 |
| Cow position: | chrX:19023566-19023080 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 331 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 10, 39 |
| Conread position: | 32-359 |
| Cow position: | chrX:6694310-6694656 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 80, 21 |
| Conread position: | 33-341 |
| Cow position: | chrX:38667499-38667830 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 33-393 |
| Cow position: | chrX:17933360-17933722 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 144, 27 |
| Conread position: | 35-315 |
| Cow position: | chrX:12094299-12094593 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 117, 18 |
| Conread position: | 89-503 |
| Cow position: | chrX:16732678-16733093 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 291 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 60, 99 |
| Conread position: | 91-502 |
| Cow position: | chrX:40279877-40279461 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 7, 52 |
| Conread position: | 97-359 |
| Cow position: | chrX:25232633-25232364 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 16, 170 |
| Conread position: | 97-383 |
| Cow position: | chrX:26875841-26876131 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 234 |
| Conread position: | 97-502 |
| Cow position: | chrX:17630763-17631177 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 50 |
| Conread position: | 103-375 |
| Cow position: | chrX:10373351-10373065 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 107-359 |
| Cow position: | chrX:18293949-18293706 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 169, 13 |
| Conread position: | 109-359 |
| Cow position: | chrX:488520-488264 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 35 |
| Conread position: | 112-357 |
| Cow position: | chrX:630287-630532 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 91, 30 |
| Conread position: | 113-504 |
| Cow position: | chrX:11675087-11674711 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 275 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 115-500 |
| Cow position: | chrX:24259562-24259954 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 105, 222 |
| Conread position: | 123-501 |
| Cow position: | chrX:905359-904965 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 76, 23 |
| Conread position: | 127-344 |
| Cow position: | chrX:18248312-18248100 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 54 |
| Conread position: | 127-358 |
| Cow position: | chrX:20791811-20792043 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 67, 19 |
| Conread position: | 127-502 |
| Cow position: | chrX:29032417-29032039 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 10 |
| Conread position: | 129-373 |
| Cow position: | chrX:20653400-20653155 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 32 |
| Conread position: | 129-503 |
| Cow position: | chrX:2764882-2764489 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 130-359 |
| Cow position: | chrX:18456407-18456166 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 132-381 |
| Cow position: | chrX:619006-619256 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 27, 42 |
| Conread position: | 133-372 |
| Cow position: | chrX:17271281-17271528 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 133-377 |
| Cow position: | chrX:25419154-25419405 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 73, 211 |
| Conread position: | 133-502 |
| Cow position: | chrX:7425470-7425083 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 133-527 |
| Cow position: | chrX:40692750-40693132 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 274 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 61, 85 |
| Conread position: | 135-367 |
| Cow position: | chrX:25338186-25337945 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 14 |
| Conread position: | 141-377 |
| Cow position: | chrX:8517864-8517632 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 8 |
| Conread position: | 141-407 |
| Cow position: | chrX:21672551-21672277 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 142-383 |
| Cow position: | chrX:8558468-8558713 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 15, 7 |
| Conread position: | 142-503 |
| Cow position: | chrX:38840883-38840508 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 261 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 64, 97 |
| Conread position: | 143-500 |
| Cow position: | chrX:16283950-16284321 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 6 |
| Conread position: | 144-356 |
| Cow position: | chrX:1616052-1616271 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 154-359 |
| Cow position: | chrX:28856956-28856751 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 48, 65 |
| Conread position: | 154-372 |
| Cow position: | chrX:36693218-36692996 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 154-375 |
| Cow position: | chrX:160050-160275 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 185 |
| Conread position: | 155-350 |
| Cow position: | chrX:28929818-28929625 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 39, 43 |
| Conread position: | 155-357 |
| Cow position: | chrX:17042674-17042466 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 155-359 |
| Cow position: | chrX:2648372-2648576 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 39, 126 |
| Conread position: | 155-370 |
| Cow position: | chrX:36840851-36840636 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 22 |
| Conread position: | 155-373 |
| Cow position: | chrX:32743516-32743298 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 51, 101 |
| Conread position: | 155-379 |
| Cow position: | chrX:6563502-6563266 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 51, 167 |
| Conread position: | 155-454 |
| Cow position: | chrX:21004662-21004360 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 39, 20 |
| Conread position: | 155-472 |
| Cow position: | chrX:13323016-13323335 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 47, 39 |
| Conread position: | 156-358 |
| Cow position: | chrX:35925936-35925742 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 156-359 |
| Cow position: | chrX:43647767-43647970 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 38 |
| Conread position: | 156-401 |
| Cow position: | chrX:21816243-21815991 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 38, 183 |
| Conread position: | 160-359 |
| Cow position: | chrX:13245571-13245365 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 148 |
| Conread position: | 162-373 |
| Cow position: | chrX:32020154-32020362 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 115, 9 |
| Conread position: | 162-377 |
| Cow position: | chrX:12249767-12249561 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 115, 9 |
| Conread position: | 162-406 |
| Cow position: | chrX:2206585-2206817 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 115, 9 |
| Conread position: | 162-502 |
| Cow position: | chrX:2147312-2146971 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 243 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 54, 10 |
| Conread position: | 162-503 |
| Cow position: | chrX:39558385-39558715 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 115, 9 |
| Conread position: | 164-471 |
| Cow position: | chrX:23514052-23514354 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 113, 7 |
| Conread position: | 167-353 |
| Cow position: | chrX:281093-280914 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 27, 55 |
| Conread position: | 167-359 |
| Cow position: | chrX:17794944-17794759 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 110, 14 |
| Conread position: | 167-482 |
| Cow position: | chrX:35284589-35284255 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 27, 113 |
| Conread position: | 168-373 |
| Cow position: | chrX:33020452-33020246 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 170 |
| Conread position: | 172-383 |
| Cow position: | chrX:6607389-6607171 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 14, 167 |
| Conread position: | 179-503 |
| Cow position: | chrX:42499071-42499416 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 38, 24 |
| Conread position: | 180-500 |
| Cow position: | chrX:26625716-26626030 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 181-373 |
| Cow position: | chrX:20710026-20709830 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 86, 31 |
| Conread position: | 182-359 |
| Cow position: | chrX:42855363-42855182 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 85, 21 |
| Conread position: | 182-373 |
| Cow position: | chrX:6012150-6012347 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 182-502 |
| Cow position: | chrX:23414409-23414729 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 12, 40 |
| Conread position: | 186-367 |
| Cow position: | chrX:39346832-39347020 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 12, 158 |
| Conread position: | 188-359 |
| Cow position: | chrX:41743854-41743687 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 89, 15 |
| Conread position: | 188-373 |
| Cow position: | chrX:31442879-31443061 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 88, 8 |
| Conread position: | 189-353 |
| Cow position: | chrX:24827276-24827106 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 31, 19 |
| Conread position: | 190-359 |
| Cow position: | chrX:4482910-4482736 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 193-502 |
| Cow position: | chrX:2700866-2701178 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 227 |
| Conread position: | 193-503 |
| Cow position: | chrX:38935226-38934907 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 71, 215 |
| Conread position: | 194-503 |
| Cow position: | chrX:15994348-15994052 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 194 |
| Conread position: | 195-502 |
| Cow position: | chrX:47243333-47243650 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 212 |
| Conread position: | 195-504 |
| Cow position: | chrX:13058523-13058215 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 203 |
| Conread position: | 196-501 |
| Cow position: | chrX:25281527-25281831 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 78, 30 |
| Conread position: | 197-406 |
| Cow position: | chrX:2029333-2029117 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 23, 147 |
| Conread position: | 200-501 |
| Cow position: | chrX:18287124-18287431 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 201-502 |
| Cow position: | chrX:31571325-31571038 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 212 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 212, 46 |
| Conread position: | 201-502 |
| Cow position: | chrX:33827084-33827378 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 24, 214 |
| Conread position: | 202-359 |
| Cow position: | chrX:6659312-6659147 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 6, 108 |
| Conread position: | 203-359 |
| Cow position: | chrX:41167036-41167190 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 74, 17 |
| Conread position: | 203-373 |
| Cow position: | chrX:20582956-20582790 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 54, 16 |
| Conread position: | 203-391 |
| Cow position: | chrX:36975880-36975692 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 74, 166 |
| Conread position: | 203-401 |
| Cow position: | chrX:20168137-20167936 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 23 |
| Conread position: | 203-502 |
| Cow position: | chrX:37489656-37489371 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 271, 23 |
| Conread position: | 203-502 |
| Cow position: | chrX:42492585-42492877 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 74, 25 |
| Conread position: | 208-365 |
| Cow position: | chrX:22074727-22074568 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 208-381 |
| Cow position: | chrX:27394093-27394262 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 69, 43 |
| Conread position: | 208-490 |
| Cow position: | chrX:44961676-44961378 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 9, 25 |
| Conread position: | 208-503 |
| Cow position: | chrX:7513441-7513143 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 15, 122 |
| Conread position: | 208-503 |
| Cow position: | chrX:11073262-11073553 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 69, 169 |
| Conread position: | 210-389 |
| Cow position: | chrX:6640049-6639868 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 210-497 |
| Cow position: | chrX:24524799-24524501 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 66, 166 |
| Conread position: | 212-358 |
| Cow position: | chrX:7361929-7362078 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 64, 141 |
| Conread position: | 214-502 |
| Cow position: | chrX:42530535-42530831 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 54 |
| Conread position: | 216-503 |
| Cow position: | chrX:22139150-22139431 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 183, 5 |
| Conread position: | 217-359 |
| Cow position: | chrX:3154327-3154472 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 123 |
| Conread position: | 217-359 |
| Cow position: | chrX:15329567-15329427 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 36 |
| Conread position: | 217-502 |
| Cow position: | chrX:23970301-23970011 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 59 |
| Conread position: | 217-503 |
| Cow position: | chrX:9538479-9538196 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 58, 167 |
| Conread position: | 217-504 |
| Cow position: | chrX:9838059-9837771 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 54, 149 |
| Conread position: | 218-359 |
| Cow position: | chrX:17743980-17743834 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 221-359 |
| Cow position: | chrX:10462548-10462411 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 221-359 |
| Cow position: | chrX:31059059-31058922 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 64 |
| Conread position: | 221-359 |
| Cow position: | chrX:42500404-42500268 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 115 |
| Conread position: | 221-367 |
| Cow position: | chrX:3161101-3161250 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 221-407 |
| Cow position: | chrX:18989581-18989389 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 46, 146 |
| Conread position: | 221-414 |
| Cow position: | chrX:8519420-8519231 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 58, 91 |
| Conread position: | 221-502 |
| Cow position: | chrX:37364654-37364376 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 137, 52 |
| Conread position: | 221-502 |
| Cow position: | chrX:37906881-37906605 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 214 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 46, 182 |
| Conread position: | 221-502 |
| Cow position: | chrX:38549365-38549065 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 221-503 |
| Cow position: | chrX:9855217-9854931 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 46, 203 |
| Conread position: | 221-503 |
| Cow position: | chrX:9954058-9953772 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 46, 203 |
| Conread position: | 221-503 |
| Cow position: | chrX:44908232-44907968 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 48 |
| Conread position: | 221-520 |
| Cow position: | chrX:25163732-25163434 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 51, 135 |
| Conread position: | 222-353 |
| Cow position: | chrX:23091793-23091661 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 222-356 |
| Cow position: | chrX:13177553-13177688 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 222-379 |
| Cow position: | chrX:25617996-25618158 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 222-407 |
| Cow position: | chrX:38642173-38641985 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 45, 118 |
| Conread position: | 228-373 |
| Cow position: | chrX:13912985-13912839 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 48, 33 |
| Conread position: | 228-458 |
| Cow position: | chrX:20129066-20129308 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 8, 82 |
| Conread position: | 228-502 |
| Cow position: | chrX:43075904-43075634 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 49, 157 |
| Conread position: | 255-502 |
| Cow position: | chrX:32623461-32623218 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 103 |
| Conread position: | 255-502 |
| Cow position: | chrX:33538826-33538580 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 41 |
| Conread position: | 258-502 |
| Cow position: | chrX:46044920-46044672 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 20, 104 |
| Conread position: | 261-467 |
| Cow position: | chrX:46984624-46984845 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 261-503 |
| Cow position: | chrX:33519490-33519231 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 230 |
| Conread position: | 288-503 |
| Cow position: | chrX:42757525-42757309 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 48, 122 |
| Conread position: | 290-502 |
| Cow position: | chrX:27287877-27288089 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 184, 46 |
Show alignments to all cow chromosomes.