Cow genome map
| Conread name: | Lym2-sn35_F03.f1 |
| Conread position: | 421-679 |
| Cow position: | chr1:6166128-6165868 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 426-551 |
| Cow position: | chr1:67916906-67916781 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 91 |
| Conread position: | 426-680 |
| Cow position: | chr1:98023522-98023785 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 170 |
| Conread position: | 428-556 |
| Cow position: | chr1:51394291-51394159 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 8 |
| Conread position: | 429-542 |
| Cow position: | chr1:81355837-81355949 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 429-680 |
| Cow position: | chr1:22615757-22616020 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 16, 185 |
| Conread position: | 430-563 |
| Cow position: | chr1:25856557-25856422 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 432-531 |
| Cow position: | chr1:55357422-55357521 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 433-556 |
| Cow position: | chr1:52435133-52435010 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 433-680 |
| Cow position: | chr1:52913005-52913256 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 59, 84 |
| Conread position: | 433-680 |
| Cow position: | chr1:57635328-57635065 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 15 |
| Conread position: | 434-680 |
| Cow position: | chr1:102825954-102826205 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 122, 17 |
| Conread position: | 436-680 |
| Cow position: | chr1:10881679-10881420 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 437-542 |
| Cow position: | chr1:53520765-53520660 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 437-680 |
| Cow position: | chr1:98613100-98612852 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 183, 86 |
| Conread position: | 438-568 |
| Cow position: | chr1:65144603-65144733 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 443-633 |
| Cow position: | chr1:31871273-31871087 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 177, 135 |
| Conread position: | 443-679 |
| Cow position: | chr1:82337932-82338169 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 83, 51 |
| Conread position: | 443-680 |
| Cow position: | chr1:63905622-63905856 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 142, 33 |
| Conread position: | 445-680 |
| Cow position: | chr1:70534083-70534321 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 175, 133 |
| Conread position: | 461-633 |
| Cow position: | chr1:32072233-32072407 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 38 |
| Conread position: | 543-680 |
| Cow position: | chr1:79328973-79329121 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 76, 0 |
Show alignments to all cow chromosomes.