Cow genome map
| Conread name: | Lym2-sn35_F03.f1 |
| Conread position: | 421-542 |
| Cow position: | chr13:34941540-34941419 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 426-531 |
| Cow position: | chr13:34261354-34261459 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 426-552 |
| Cow position: | chr13:38278015-38277889 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 429-557 |
| Cow position: | chr13:23270088-23269960 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 429-678 |
| Cow position: | chr13:43594989-43594737 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 160, 7 |
| Conread position: | 433-541 |
| Cow position: | chr13:2339559-2339666 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 89 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 433-552 |
| Cow position: | chr13:60436754-60436635 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 433-554 |
| Cow position: | chr13:37069478-37069599 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 106, 114 |
| Conread position: | 433-555 |
| Cow position: | chr13:18989834-18989956 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 433-558 |
| Cow position: | chr13:34728708-34728585 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 433-603 |
| Cow position: | chr13:52879537-52879699 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 16, 94 |
| Conread position: | 433-666 |
| Cow position: | chr13:33517795-33517571 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 170, 129 |
| Conread position: | 433-680 |
| Cow position: | chr13:22780075-22780340 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 90 |
| Conread position: | 434-556 |
| Cow position: | chr13:58043759-58043880 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 434-680 |
| Cow position: | chr13:9570118-9570368 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 186, 28 |
| Conread position: | 434-680 |
| Cow position: | chr13:48251864-48251628 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 152 |
| Conread position: | 436-535 |
| Cow position: | chr13:15041340-15041241 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 437-558 |
| Cow position: | chr13:11290688-11290566 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 44, 112 |
| Conread position: | 437-593 |
| Cow position: | chr13:23166963-23166808 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 437-678 |
| Cow position: | chr13:57745966-57745737 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 440-680 |
| Cow position: | chr13:11825750-11825994 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 8, 82 |
| Conread position: | 443-676 |
| Cow position: | chr13:14063385-14063151 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 177, 77 |
| Conread position: | 443-679 |
| Cow position: | chr13:42200758-42201008 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 102, 80 |
| Conread position: | 444-626 |
| Cow position: | chr13:30674003-30673816 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 101, 18 |
| Conread position: | 481-680 |
| Cow position: | chr13:606878-606659 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 64, 9 |
| Conread position: | 486-639 |
| Cow position: | chr13:53069647-53069800 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 134, 102 |
Show alignments to all cow chromosomes.