Cow genome map
| Conread name: | Lym2-sn35_F03.f1 |
| Conread position: | 421-542 |
| Cow position: | chr3:50329230-50329351 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 426-542 |
| Cow position: | chr3:29172222-29172107 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 426-556 |
| Cow position: | chr3:54960029-54959901 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 427-542 |
| Cow position: | chr3:79292673-79292558 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 427-564 |
| Cow position: | chr3:58865619-58865757 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 428-542 |
| Cow position: | chr3:42423494-42423607 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 429-542 |
| Cow position: | chr3:53046820-53046933 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 429-680 |
| Cow position: | chr3:51234258-51234505 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 101 |
| Conread position: | 431-538 |
| Cow position: | chr3:29596228-29596121 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 5 |
| Conread position: | 433-556 |
| Cow position: | chr3:3032228-3032108 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 36, 53 |
| Conread position: | 433-639 |
| Cow position: | chr3:73759683-73759880 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 21, 70 |
| Conread position: | 433-665 |
| Cow position: | chr3:23471631-23471874 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 433-668 |
| Cow position: | chr3:73467455-73467210 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 20, 52 |
| Conread position: | 433-674 |
| Cow position: | chr3:17895684-17895432 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 121, 39 |
| Conread position: | 436-567 |
| Cow position: | chr3:49784141-49784010 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 436-680 |
| Cow position: | chr3:49388675-49388433 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 89, 111 |
| Conread position: | 436-680 |
| Cow position: | chr3:59333596-59333342 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 86, 13 |
| Conread position: | 437-558 |
| Cow position: | chr3:11640263-11640142 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 437-562 |
| Cow position: | chr3:38497780-38497656 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 437-680 |
| Cow position: | chr3:54862590-54862837 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 111 |
| Conread position: | 441-680 |
| Cow position: | chr3:33468656-33468889 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 93, 143 |
| Conread position: | 441-680 |
| Cow position: | chr3:39171659-39171893 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 162, 153 |
| Conread position: | 443-679 |
| Cow position: | chr3:17937016-17937239 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 443-679 |
| Cow position: | chr3:39970049-39970283 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 159, 103 |
| Conread position: | 443-679 |
| Cow position: | chr3:42914275-42914036 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 182, 47 |
| Conread position: | 443-680 |
| Cow position: | chr3:33693472-33693236 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 178, 101 |
| Conread position: | 443-680 |
| Cow position: | chr3:48275649-48275409 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 177, 80 |
| Conread position: | 443-680 |
| Cow position: | chr3:48629762-48630002 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 84, 150 |
| Conread position: | 443-680 |
| Cow position: | chr3:56102259-56102023 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 87, 49 |
| Conread position: | 443-680 |
| Cow position: | chr3:64281113-64281348 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 177, 121 |
| Conread position: | 485-680 |
| Cow position: | chr3:27867642-27867442 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 135, 83 |
| Conread position: | 558-680 |
| Cow position: | chr3:31119918-31120049 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 63, 30 |
Show alignments to all cow chromosomes.