Cow genome map
| Conread name: | Lym2-sn35_F03.f1 |
| Conread position: | 429-542 |
| Cow position: | chr5:12709773-12709659 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 96 |
| Conread position: | 429-542 |
| Cow position: | chr5:43738065-43738175 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 89 |
| Conread position: | 429-542 |
| Cow position: | chr5:45225937-45226051 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 8, 58 |
| Conread position: | 429-618 |
| Cow position: | chr5:32339090-32339282 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 13, 9 |
| Conread position: | 432-566 |
| Cow position: | chr5:68604741-68604608 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 433-553 |
| Cow position: | chr5:30253623-30253507 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 433-639 |
| Cow position: | chr5:54530868-54530665 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 18, 151 |
| Conread position: | 433-668 |
| Cow position: | chr5:9499207-9499453 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 21, 164 |
| Conread position: | 433-668 |
| Cow position: | chr5:49565259-49565042 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 433-675 |
| Cow position: | chr5:28230039-28229792 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 151 |
| Conread position: | 433-680 |
| Cow position: | chr5:2500307-2500533 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 433-680 |
| Cow position: | chr5:42744670-42744429 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 187, 25 |
| Conread position: | 434-533 |
| Cow position: | chr5:45036902-45036804 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 85 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 435-680 |
| Cow position: | chr5:57890379-57890131 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 147 |
| Conread position: | 436-542 |
| Cow position: | chr5:72310593-72310487 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 437-532 |
| Cow position: | chr5:60126251-60126156 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 80 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 437-680 |
| Cow position: | chr5:26046212-26045959 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 14, 87 |
| Conread position: | 437-680 |
| Cow position: | chr5:53835592-53835354 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 147, 99 |
| Conread position: | 443-673 |
| Cow position: | chr5:37714030-37714266 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 35, 144 |
| Conread position: | 443-680 |
| Cow position: | chr5:50900776-50900530 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 102, 26 |
| Conread position: | 449-639 |
| Cow position: | chr5:1460557-1460740 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 113 |
| Conread position: | 458-680 |
| Cow position: | chr5:57156645-57156407 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 462-633 |
| Cow position: | chr5:37814476-37814306 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 144 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 158, 84 |
| Conread position: | 462-680 |
| Cow position: | chr5:34300780-34300551 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 6, 134 |
Show alignments to all cow chromosomes.