Cow genome map
| Conread name: | Lym2-sn35_F03.f1 |
| Conread position: | 426-557 |
| Cow position: | chr6:18988118-18987989 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 427-550 |
| Cow position: | chr6:12337885-12337764 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 429-553 |
| Cow position: | chr6:14850814-14850937 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 96, 110 |
| Conread position: | 429-558 |
| Cow position: | chr6:28148150-28148022 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 7 |
| Conread position: | 432-680 |
| Cow position: | chr6:49685482-49685233 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 196 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 188, 150 |
| Conread position: | 433-541 |
| Cow position: | chr6:19508535-19508642 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 433-542 |
| Cow position: | chr6:64431835-64431726 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 433-631 |
| Cow position: | chr6:36202724-36202521 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 433-637 |
| Cow position: | chr6:6995049-6995252 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 106 |
| Conread position: | 433-639 |
| Cow position: | chr6:14201598-14201390 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 10, 132 |
| Conread position: | 433-674 |
| Cow position: | chr6:16288524-16288776 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 112, 18 |
| Conread position: | 433-680 |
| Cow position: | chr6:40774451-40774696 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 8, 138 |
| Conread position: | 433-680 |
| Cow position: | chr6:66433844-66433590 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 152 |
| Conread position: | 434-556 |
| Cow position: | chr6:53345691-53345569 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 434-680 |
| Cow position: | chr6:66874256-66874002 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 7, 18 |
| Conread position: | 436-639 |
| Cow position: | chr6:48406456-48406251 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 181 |
| Conread position: | 436-679 |
| Cow position: | chr6:13717742-13717493 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 184, 7 |
| Conread position: | 437-557 |
| Cow position: | chr6:32867314-32867434 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 437-591 |
| Cow position: | chr6:56041730-56041888 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 438-530 |
| Cow position: | chr6:3592014-3591922 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 80 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 441-679 |
| Cow position: | chr6:14289446-14289693 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 40, 35 |
| Conread position: | 443-639 |
| Cow position: | chr6:51191700-51191513 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 78 |
| Conread position: | 443-639 |
| Cow position: | chr6:65846561-65846765 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 443-680 |
| Cow position: | chr6:67968728-67968957 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 91 |
| Conread position: | 444-675 |
| Cow position: | chr6:9323043-9322819 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 449-639 |
| Cow position: | chr6:22986111-22986294 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 169, 74 |
| Conread position: | 450-680 |
| Cow position: | chr6:67304680-67304455 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 166, 73 |
| Conread position: | 451-639 |
| Cow position: | chr6:19045263-19045062 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 91, 79 |
| Conread position: | 533-673 |
| Cow position: | chr6:47640667-47640816 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 88, 52 |
Show alignments to all cow chromosomes.