Cow genome map
| Conread name: | Lym2-sn35_F03.f1 |
| Conread position: | 391-637 |
| Cow position: | chr8:55323589-55323347 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 159 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 229, 194 |
| Conread position: | 427-542 |
| Cow position: | chr8:25579412-25579299 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 74 |
| Conread position: | 427-636 |
| Cow position: | chr8:9051145-9051354 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 154, 9 |
| Conread position: | 431-550 |
| Cow position: | chr8:38851752-38851637 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 432-680 |
| Cow position: | chr8:225497-225757 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 188, 162 |
| Conread position: | 433-542 |
| Cow position: | chr8:1303772-1303664 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 433-542 |
| Cow position: | chr8:25083136-25083027 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 433-552 |
| Cow position: | chr8:27955570-27955688 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 433-557 |
| Cow position: | chr8:33585028-33584901 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 433-569 |
| Cow position: | chr8:48955783-48955647 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 108, 114 |
| Conread position: | 433-614 |
| Cow position: | chr8:47136141-47136319 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 434-680 |
| Cow position: | chr8:42794448-42794705 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 110, 15 |
| Conread position: | 436-678 |
| Cow position: | chr8:16093145-16092896 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 86, 150 |
| Conread position: | 436-680 |
| Cow position: | chr8:36858236-36858491 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 5, 37 |
| Conread position: | 437-639 |
| Cow position: | chr8:9288112-9287910 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 183, 151 |
| Conread position: | 437-639 |
| Cow position: | chr8:24867883-24868079 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 164 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 188, 109 |
| Conread position: | 437-672 |
| Cow position: | chr8:54231161-54230926 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 198, 44 |
| Conread position: | 438-680 |
| Cow position: | chr8:28670278-28670027 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 165, 138 |
| Conread position: | 440-680 |
| Cow position: | chr8:35583700-35583939 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 441-680 |
| Cow position: | chr8:46743477-46743707 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 443-542 |
| Cow position: | chr8:25349565-25349466 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 83 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 443-678 |
| Cow position: | chr8:58346665-58346433 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 102 |
| Conread position: | 443-680 |
| Cow position: | chr8:300160-300418 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 101, 249 |
| Conread position: | 443-680 |
| Cow position: | chr8:18763026-18762776 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 444-680 |
| Cow position: | chr8:5702563-5702796 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 37, 81 |
| Conread position: | 445-661 |
| Cow position: | chr8:32719833-32719609 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 477-599 |
| Cow position: | chr8:41905780-41905900 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 108, 0 |
Show alignments to all cow chromosomes.