Cow genome map

Conread name: Lym2-sn35_F03.f1

Conread position: 429-542
Cow position: chrX:41167076-41167190 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 7, 96

Conread position: 429-550
Cow position: chrX:33639857-33639737 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 429-639
Cow position: chrX:21004571-21004369 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 168
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 24, 7

Conread position: 429-680
Cow position: chrX:42282320-42282065 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 107

Conread position: 432-680
Cow position: chrX:18287173-18287423 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 203, 71

Conread position: 432-680
Cow position: chrX:29032296-29032047 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 190, 26

Conread position: 433-542
Cow position: chrX:34238603-34238495 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 433-554
Cow position: chrX:40647860-40647740 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 105
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 90, 0

Conread position: 433-556
Cow position: chrX:25238059-25237938 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 90, 0

Conread position: 433-556
Cow position: chrX:38967533-38967410 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 433-591
Cow position: chrX:6640008-6639849 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 87, 0

Conread position: 433-632
Cow position: chrX:20129090-20129287 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 111, 56

Conread position: 433-633
Cow position: chrX:34543669-34543481 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 187, 51

Conread position: 433-636
Cow position: chrX:35284507-35284298 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 159

Conread position: 433-680
Cow position: chrX:1514519-1514765 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 187, 9

Conread position: 433-680
Cow position: chrX:11455175-11455408 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 180
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 60, 22

Conread position: 434-542
Cow position: chrX:37843602-37843494 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 436-635
Cow position: chrX:17122126-17122317 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 180, 25

Conread position: 436-680
Cow position: chrX:20168090-20167815 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 0

Conread position: 437-639
Cow position: chrX:42530576-42530773 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 183, 12

Conread position: 437-674
Cow position: chrX:47243399-47243635 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 191
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 25, 146

Conread position: 443-602
Cow position: chrX:2029262-2029108 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 443-630
Cow position: chrX:16416379-16416195 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 154
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 173, 66

Conread position: 443-631
Cow position: chrX:46984624-46984814 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 86, 146

Conread position: 443-645
Cow position: chrX:33519490-33519284 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 0

Conread position: 443-675
Cow position: chrX:44961620-44961379 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 177, 148

Conread position: 443-679
Cow position: chrX:37906837-37906614 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 76, 106

Conread position: 443-680
Cow position: chrX:46044917-46044680 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 181, 137

Conread position: 445-680
Cow position: chrX:7425336-7425091 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 94, 104

Conread position: 511-675
Cow position: chrX:10394490-10394309 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 33, 0

Show alignments to all cow chromosomes.