Cow genome map
| Conread name: | Lym2-sn39_H10.f |
| Conread position: | 42-479 |
| Cow position: | chr10:38545809-38546245 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 43 |
| Conread position: | 67-380 |
| Cow position: | chr10:8327879-8328194 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 114 |
| Conread position: | 67-420 |
| Cow position: | chr10:33346990-33346639 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 97-476 |
| Cow position: | chr10:11820693-11820315 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 249 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 27, 133 |
| Conread position: | 97-481 |
| Cow position: | chr10:16925897-16925512 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 113 |
| Conread position: | 97-489 |
| Cow position: | chr10:124671-124279 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 97-489 |
| Cow position: | chr10:8290340-8289952 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 139 |
| Conread position: | 97-489 |
| Cow position: | chr10:32651095-32650702 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 97-489 |
| Cow position: | chr10:37770183-37769792 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 98-486 |
| Cow position: | chr10:15861777-15862164 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 90 |
| Conread position: | 99-479 |
| Cow position: | chr10:22101589-22101211 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 100-479 |
| Cow position: | chr10:40152094-40152475 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 215 |
| Conread position: | 103-481 |
| Cow position: | chr10:29696586-29696214 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 351, 87 |
| Conread position: | 104-287 |
| Cow position: | chr10:22843102-22842921 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 106-319 |
| Cow position: | chr10:60192483-60192270 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 80, 61 |
| Conread position: | 119-489 |
| Cow position: | chr10:34317956-34318322 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 138 |
| Conread position: | 121-478 |
| Cow position: | chr10:62216944-62216587 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 279 |
| Conread position: | 121-481 |
| Cow position: | chr10:11685334-11685690 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 0 |
| Conread position: | 121-481 |
| Cow position: | chr10:39853673-39854037 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 121-481 |
| Cow position: | chr10:62778685-62778323 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 280 |
| Conread position: | 121-489 |
| Cow position: | chr10:1375870-1375504 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 290 |
| Conread position: | 121-489 |
| Cow position: | chr10:2122925-2123293 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-489 |
| Cow position: | chr10:19511943-19511575 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 112 |
| Conread position: | 121-489 |
| Cow position: | chr10:38345025-38345393 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 123-479 |
| Cow position: | chr10:25498687-25498331 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 124-474 |
| Cow position: | chr10:46694044-46694391 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 125-475 |
| Cow position: | chr10:40751980-40751634 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 245 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 190, 95 |
| Conread position: | 126-481 |
| Cow position: | chr10:14804168-14803812 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 35 |
| Conread position: | 126-481 |
| Cow position: | chr10:19495954-19496309 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-481 |
| Cow position: | chr10:21400339-21400694 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-481 |
| Cow position: | chr10:21740420-21740774 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 126-481 |
| Cow position: | chr10:41157779-41157425 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 126-481 |
| Cow position: | chr10:41567434-41567084 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 126-481 |
| Cow position: | chr10:41877250-41876896 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 126-481 |
| Cow position: | chr10:47907110-47906755 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-489 |
| Cow position: | chr10:39180115-39179753 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 138-447 |
| Cow position: | chr10:41389225-41389532 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 136, 86 |
| Conread position: | 140-489 |
| Cow position: | chr10:62408539-62408886 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 0 |
| Conread position: | 145-489 |
| Cow position: | chr10:7282374-7282716 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 158-489 |
| Cow position: | chr10:38538193-38538528 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 167-481 |
| Cow position: | chr10:39905232-39904905 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 236 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 140, 109 |
| Conread position: | 188-489 |
| Cow position: | chr10:19143066-19143369 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 126 |
| Conread position: | 230-481 |
| Cow position: | chr10:276817-276571 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 252-481 |
| Cow position: | chr10:54059150-54059377 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 309-489 |
| Cow position: | chr10:60489803-60489629 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 313-481 |
| Cow position: | chr10:19840298-19840130 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 335-489 |
| Cow position: | chr10:29846486-29846640 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.