Cow genome map


           Conread name:
           Lym2-sn39_H10.f
        

               Conread position:
               67-325
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               67-427
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 121
               

               Conread position:
               68-383
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               97-481
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               97-489
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               97-489
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 68
               

               Conread position:
               97-489
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 322
               

               Conread position:
               97-489
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 308
               

               Conread position:
               100-325
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 59
               

               Conread position:
               100-481
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               100-489
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               100-489
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 240
               

               Conread position:
               102-479
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 134
               

               Conread position:
               106-481
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               110-369
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               110-481
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               110-481
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               113-481
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               313, 0
               

               Conread position:
               113-481
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               113-489
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-487
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 0
               

               Conread position:
               121-478
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 0
               

               Conread position:
               121-481
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               239, 0
               

               Conread position:
               121-481
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 31
               

               Conread position:
               121-481
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 173
               

               Conread position:
               121-481
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-481
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 154
               

               Conread position:
               121-484
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               121-488
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 93
               

               Conread position:
               121-489
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               121-489
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               121-489
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               121-489
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 19
               

               Conread position:
               121-489
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               122-481
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 96
               

               Conread position:
               122-489
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               249
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               123-369
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               46, 35
               

               Conread position:
               123-479
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               123-481
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 0
               

               Conread position:
               124-489
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 0
               

               Conread position:
               126-479
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               126-479
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               264, 0
               

               Conread position:
               126-481
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               126-481
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 0
               

               Conread position:
               126-481
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               126-489
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               131-481
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               134-481
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               140-486
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               321, 254
               

               Conread position:
               245-481
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               46, 0
               
Show alignments to all cow chromosomes.