Cow genome map
Conread name: | Lym2-sn39_H10.f |
Conread position: | 67-325 |
Cow position: | chr14:33675784-33675524 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 29 |
Conread position: | 67-427 |
Cow position: | chr14:40339654-40339306 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 255 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 121 |
Conread position: | 68-383 |
Cow position: | chr14:12609151-12608846 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 220 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 24, 16 |
Conread position: | 97-481 |
Cow position: | chr14:19328326-19328711 (view UCSC Genome Browser custom track) |
Alignm length: | 387 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 22 |
Conread position: | 97-489 |
Cow position: | chr14:5529004-5528611 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 22 |
Conread position: | 97-489 |
Cow position: | chr14:7472310-7471924 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 68 |
Conread position: | 97-489 |
Cow position: | chr14:16919748-16920139 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 322 |
Conread position: | 97-489 |
Cow position: | chr14:48254363-48254761 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 308 |
Conread position: | 100-325 |
Cow position: | chr14:30706752-30706974 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 156 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 16, 59 |
Conread position: | 100-481 |
Cow position: | chr14:45712053-45712419 (view UCSC Genome Browser custom track) |
Alignm length: | 382 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 0 |
Conread position: | 100-489 |
Cow position: | chr14:38532352-38532745 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 100-489 |
Cow position: | chr14:50110506-50110121 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 240 |
Conread position: | 102-479 |
Cow position: | chr14:13302965-13302590 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 134 |
Conread position: | 106-481 |
Cow position: | chr14:44130844-44130476 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 0 |
Conread position: | 110-369 |
Cow position: | chr14:45770852-45771105 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 110-481 |
Cow position: | chr14:36968182-36967812 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 110-481 |
Cow position: | chr14:45851149-45850783 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 113-481 |
Cow position: | chr14:44422479-44422113 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 313, 0 |
Conread position: | 113-481 |
Cow position: | chr14:45767926-45767564 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 113-489 |
Cow position: | chr14:28993929-28994305 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 117-487 |
Cow position: | chr14:20782377-20782008 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 224, 0 |
Conread position: | 121-478 |
Cow position: | chr14:44685960-44685609 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 0 |
Conread position: | 121-481 |
Cow position: | chr14:7830623-7830982 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 239, 0 |
Conread position: | 121-481 |
Cow position: | chr14:13660069-13660431 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 31 |
Conread position: | 121-481 |
Cow position: | chr14:23690312-23690667 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 245, 173 |
Conread position: | 121-481 |
Cow position: | chr14:23900883-23901243 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 121-481 |
Cow position: | chr14:41084864-41085225 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 154 |
Conread position: | 121-484 |
Cow position: | chr14:47624470-47624124 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 121-488 |
Cow position: | chr14:30596467-30596830 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 132, 93 |
Conread position: | 121-489 |
Cow position: | chr14:13864165-13864534 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 0 |
Conread position: | 121-489 |
Cow position: | chr14:16273380-16273746 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 121-489 |
Cow position: | chr14:17001142-17001505 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 121-489 |
Cow position: | chr14:17685313-17684945 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 277 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 19 |
Conread position: | 121-489 |
Cow position: | chr14:37223818-37223452 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 122-481 |
Cow position: | chr14:37413972-37414331 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 219, 96 |
Conread position: | 122-489 |
Cow position: | chr14:9102205-9102544 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 249 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 123-369 |
Cow position: | chr14:32533845-32534076 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 172 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 46, 35 |
Conread position: | 123-479 |
Cow position: | chr14:44855512-44855867 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 0 |
Conread position: | 123-481 |
Cow position: | chr14:44226312-44225965 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 0 |
Conread position: | 124-489 |
Cow position: | chr14:22031773-22032136 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 205, 0 |
Conread position: | 126-479 |
Cow position: | chr14:750482-750129 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 126-479 |
Cow position: | chr14:2284251-2283899 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 264, 0 |
Conread position: | 126-481 |
Cow position: | chr14:9045478-9045123 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 126-481 |
Cow position: | chr14:23257271-23256917 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 0 |
Conread position: | 126-481 |
Cow position: | chr14:29047991-29048344 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 192, 0 |
Conread position: | 126-489 |
Cow position: | chr14:45672133-45672495 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 131-481 |
Cow position: | chr14:45029217-45029558 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 262 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 134-481 |
Cow position: | chr14:30585048-30585387 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 140-486 |
Cow position: | chr14:13479836-13480175 (view UCSC Genome Browser custom track) |
Alignm length: | 348 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 321, 254 |
Conread position: | 245-481 |
Cow position: | chr14:45080313-45080078 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 169 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 46, 0 |
Show alignments to all cow chromosomes.