Cow genome map

Conread name: Lym2-sn39_H10.f

Conread position: 67-325
Cow position: chr14:33675784-33675524 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 29

Conread position: 67-427
Cow position: chr14:40339654-40339306 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 121

Conread position: 68-383
Cow position: chr14:12609151-12608846 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 24, 16

Conread position: 97-481
Cow position: chr14:19328326-19328711 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-489
Cow position: chr14:5529004-5528611 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-489
Cow position: chr14:7472310-7471924 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 68

Conread position: 97-489
Cow position: chr14:16919748-16920139 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 322

Conread position: 97-489
Cow position: chr14:48254363-48254761 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 308

Conread position: 100-325
Cow position: chr14:30706752-30706974 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 59

Conread position: 100-481
Cow position: chr14:45712053-45712419 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 100-489
Cow position: chr14:38532352-38532745 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 100-489
Cow position: chr14:50110506-50110121 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 240

Conread position: 102-479
Cow position: chr14:13302965-13302590 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 134

Conread position: 106-481
Cow position: chr14:44130844-44130476 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 110-369
Cow position: chr14:45770852-45771105 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 110-481
Cow position: chr14:36968182-36967812 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 110-481
Cow position: chr14:45851149-45850783 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 113-481
Cow position: chr14:44422479-44422113 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 0

Conread position: 113-481
Cow position: chr14:45767926-45767564 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 113-489
Cow position: chr14:28993929-28994305 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 117-487
Cow position: chr14:20782377-20782008 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 0

Conread position: 121-478
Cow position: chr14:44685960-44685609 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 0

Conread position: 121-481
Cow position: chr14:7830623-7830982 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 0

Conread position: 121-481
Cow position: chr14:13660069-13660431 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 31

Conread position: 121-481
Cow position: chr14:23690312-23690667 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 173

Conread position: 121-481
Cow position: chr14:23900883-23901243 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position: chr14:41084864-41085225 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 154

Conread position: 121-484
Cow position: chr14:47624470-47624124 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 121-488
Cow position: chr14:30596467-30596830 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 93

Conread position: 121-489
Cow position: chr14:13864165-13864534 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 121-489
Cow position: chr14:16273380-16273746 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 121-489
Cow position: chr14:17001142-17001505 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 121-489
Cow position: chr14:17685313-17684945 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 19

Conread position: 121-489
Cow position: chr14:37223818-37223452 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 122-481
Cow position: chr14:37413972-37414331 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 96

Conread position: 122-489
Cow position: chr14:9102205-9102544 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 249
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 123-369
Cow position: chr14:32533845-32534076 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 46, 35

Conread position: 123-479
Cow position: chr14:44855512-44855867 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 0

Conread position: 123-481
Cow position: chr14:44226312-44225965 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 0

Conread position: 124-489
Cow position: chr14:22031773-22032136 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 0

Conread position: 126-479
Cow position: chr14:750482-750129 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-479
Cow position: chr14:2284251-2283899 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 0

Conread position: 126-481
Cow position: chr14:9045478-9045123 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position: chr14:23257271-23256917 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 0

Conread position: 126-481
Cow position: chr14:29047991-29048344 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 0

Conread position: 126-489
Cow position: chr14:45672133-45672495 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 0

Conread position: 131-481
Cow position: chr14:45029217-45029558 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 134-481
Cow position: chr14:30585048-30585387 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 140-486
Cow position: chr14:13479836-13480175 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 254

Conread position: 245-481
Cow position: chr14:45080313-45080078 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 46, 0

Show alignments to all cow chromosomes.