Cow genome map
| Conread name: | Lym2-sn39_H10.f |
| Conread position: | 67-414 |
| Cow position: | chr17:15371251-15370904 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 113 |
| Conread position: | 67-489 |
| Cow position: | chr17:14325310-14325715 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 26 |
| Conread position: | 97-481 |
| Cow position: | chr17:6260017-6259634 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 97-489 |
| Cow position: | chr17:14894327-14893942 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 209 |
| Conread position: | 98-489 |
| Cow position: | chr17:152302-152692 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 132 |
| Conread position: | 98-489 |
| Cow position: | chr17:13929842-13929449 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 99-481 |
| Cow position: | chr17:16890295-16889912 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 42 |
| Conread position: | 100-419 |
| Cow position: | chr17:31199494-31199792 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 304, 74 |
| Conread position: | 100-481 |
| Cow position: | chr17:1947141-1946767 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 101 |
| Conread position: | 106-292 |
| Cow position: | chr17:22557786-22557600 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 98, 121 |
| Conread position: | 106-349 |
| Cow position: | chr17:3709047-3709283 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 108-489 |
| Cow position: | chr17:11087562-11087943 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 108-489 |
| Cow position: | chr17:18103522-18103899 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 74 |
| Conread position: | 110-481 |
| Cow position: | chr17:18026598-18026968 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 353, 9 |
| Conread position: | 110-481 |
| Cow position: | chr17:23856873-23857247 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 110-489 |
| Cow position: | chr17:13856611-13856988 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 113-481 |
| Cow position: | chr17:9653304-9653667 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 113-489 |
| Cow position: | chr17:25737820-25737444 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 116-481 |
| Cow position: | chr17:6089006-6089372 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 117-376 |
| Cow position: | chr17:18324845-18325099 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 154, 69 |
| Conread position: | 121-481 |
| Cow position: | chr17:1382665-1383025 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-481 |
| Cow position: | chr17:24634103-24633743 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-481 |
| Cow position: | chr17:27345947-27345594 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 308, 73 |
| Conread position: | 121-489 |
| Cow position: | chr17:3642687-3643055 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-489 |
| Cow position: | chr17:4060248-4059884 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 121-489 |
| Cow position: | chr17:14216873-14217243 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 122-481 |
| Cow position: | chr17:15143219-15143580 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 0 |
| Conread position: | 122-489 |
| Cow position: | chr17:6001870-6002228 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 123-481 |
| Cow position: | chr17:2287533-2287177 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 342, 0 |
| Conread position: | 123-481 |
| Cow position: | chr17:35592361-35592004 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 301 |
| Conread position: | 126-478 |
| Cow position: | chr17:2262246-2261901 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 38 |
| Conread position: | 126-478 |
| Cow position: | chr17:20087603-20087939 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 126-481 |
| Cow position: | chr17:8209250-8208896 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 0 |
| Conread position: | 126-481 |
| Cow position: | chr17:20665582-20665937 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-481 |
| Cow position: | chr17:43988677-43988324 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 263, 168 |
| Conread position: | 126-489 |
| Cow position: | chr17:1880238-1879873 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 183 |
| Conread position: | 130-481 |
| Cow position: | chr17:15435931-15435580 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 131-481 |
| Cow position: | chr17:20183095-20183440 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 148-481 |
| Cow position: | chr17:16859446-16859767 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 150-489 |
| Cow position: | chr17:2556242-2555904 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 209-481 |
| Cow position: | chr17:24781109-24780837 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 245-481 |
| Cow position: | chr17:22160941-22160705 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 291-486 |
| Cow position: | chr17:15322788-15322596 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 193, 124 |
Show alignments to all cow chromosomes.