Cow genome map


           Conread name:
           Lym2-sn39_H10.f
        

               Conread position:
               51-489
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 81
               

               Conread position:
               67-484
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 17
               

               Conread position:
               67-489
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 135
               

               Conread position:
               97-472
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 96
               

               Conread position:
               97-489
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 103
               

               Conread position:
               97-489
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 268
               

               Conread position:
               97-489
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               97-489
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               99-479
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 339
               

               Conread position:
               99-489
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               100-376
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               24, 178
               

               Conread position:
               100-379
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               100-481
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               103-489
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 155
               

               Conread position:
               110-480
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 312
               

               Conread position:
               113-481
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 45
               

               Conread position:
               116-481
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               117-479
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 101
               

               Conread position:
               117-481
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 51
               

               Conread position:
               121-455
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               121-481
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-481
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 80
               

               Conread position:
               121-481
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 270
               

               Conread position:
               121-481
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 0
               

               Conread position:
               121-481
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               122-486
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               247
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               126-460
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 97
               

               Conread position:
               126-466
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               126-480
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               126-481
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               126-481
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               126-481
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               126-481
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               126-481
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               126-481
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               127-480
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               131-489
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               140-489
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 0
               

               Conread position:
               196-489
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               227-489
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 184
               

               Conread position:
               263-489
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               320-481
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.