Cow genome map
| Conread name: | Lym2-sn39_H10.f |
| Conread position: | 51-489 |
| Cow position: | chr18:37599115-37599540 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 81 |
| Conread position: | 67-484 |
| Cow position: | chr18:29237220-29236806 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 67-489 |
| Cow position: | chr18:54171452-54171856 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 135 |
| Conread position: | 97-472 |
| Cow position: | chr18:27837935-27838309 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 96 |
| Conread position: | 97-489 |
| Cow position: | chr18:14416357-14415965 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 103 |
| Conread position: | 97-489 |
| Cow position: | chr18:36508714-36508322 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 268 |
| Conread position: | 97-489 |
| Cow position: | chr18:40478764-40478376 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 97-489 |
| Cow position: | chr18:41840443-41840836 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 99-479 |
| Cow position: | chr18:16534359-16533978 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 339 |
| Conread position: | 99-489 |
| Cow position: | chr18:23798027-23797636 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 100-376 |
| Cow position: | chr18:46877630-46877906 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 24, 178 |
| Conread position: | 100-379 |
| Cow position: | chr18:46868811-46869079 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 20, 33 |
| Conread position: | 100-481 |
| Cow position: | chr18:51258362-51257974 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 103-489 |
| Cow position: | chr18:2886646-2887032 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 155 |
| Conread position: | 110-480 |
| Cow position: | chr18:6868890-6869259 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 312 |
| Conread position: | 113-481 |
| Cow position: | chr18:2019322-2019689 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 45 |
| Conread position: | 116-481 |
| Cow position: | chr18:33953213-33953571 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 117-479 |
| Cow position: | chr18:48222239-48221876 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 101 |
| Conread position: | 117-481 |
| Cow position: | chr18:53786198-53785834 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 51 |
| Conread position: | 121-455 |
| Cow position: | chr18:19539228-19539557 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 121-481 |
| Cow position: | chr18:22602844-22602484 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-481 |
| Cow position: | chr18:37505420-37505060 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 80 |
| Conread position: | 121-481 |
| Cow position: | chr18:47719227-47719587 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 270 |
| Conread position: | 121-481 |
| Cow position: | chr18:51689981-51689623 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 0 |
| Conread position: | 121-481 |
| Cow position: | chr18:54044366-54044706 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 122-486 |
| Cow position: | chr18:5980785-5980435 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 247 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 126-460 |
| Cow position: | chr18:51462727-51463057 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 97 |
| Conread position: | 126-466 |
| Cow position: | chr18:24040380-24040721 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 126-480 |
| Cow position: | chr18:55088573-55088927 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-481 |
| Cow position: | chr18:11274754-11275109 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-481 |
| Cow position: | chr18:19352734-19352382 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 126-481 |
| Cow position: | chr18:33359217-33358864 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 126-481 |
| Cow position: | chr18:43146574-43146929 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-481 |
| Cow position: | chr18:47742370-47742015 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-481 |
| Cow position: | chr18:51342038-51341683 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 127-480 |
| Cow position: | chr18:51481191-51480836 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 131-489 |
| Cow position: | chr18:28973556-28973914 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-489 |
| Cow position: | chr18:14130722-14130378 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 0 |
| Conread position: | 196-489 |
| Cow position: | chr18:54024078-54024370 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 227-489 |
| Cow position: | chr18:43201305-43201046 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 184 |
| Conread position: | 263-489 |
| Cow position: | chr18:16659803-16660016 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 320-481 |
| Cow position: | chr18:44621917-44621756 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.