Cow genome map
| Conread name: | Lym2-sn39_H10.f |
| Conread position: | 68-481 |
| Cow position: | chr20:18315242-18315626 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 296 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 106, 16 |
| Conread position: | 97-481 |
| Cow position: | chr20:5535280-5534897 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 212 |
| Conread position: | 97-481 |
| Cow position: | chr20:15292353-15291972 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 322 |
| Conread position: | 97-489 |
| Cow position: | chr20:8003883-8004275 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 212 |
| Conread position: | 97-489 |
| Cow position: | chr20:12438418-12438811 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 97-489 |
| Cow position: | chr20:13763247-13762852 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 97-489 |
| Cow position: | chr20:15097534-15097928 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 97-489 |
| Cow position: | chr20:25850649-25851040 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 343, 0 |
| Conread position: | 97-489 |
| Cow position: | chr20:28161113-28160730 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 154 |
| Conread position: | 97-489 |
| Cow position: | chr20:28565253-28565646 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 97-489 |
| Cow position: | chr20:30684663-30684285 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 134 |
| Conread position: | 98-489 |
| Cow position: | chr20:23799228-23798832 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 78 |
| Conread position: | 99-489 |
| Cow position: | chr20:3271045-3270654 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 117 |
| Conread position: | 108-481 |
| Cow position: | chr20:7116139-7116511 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 113-481 |
| Cow position: | chr20:8313114-8313478 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 246 |
| Conread position: | 116-481 |
| Cow position: | chr20:5560391-5560757 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 119-481 |
| Cow position: | chr20:25961423-25961061 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-369 |
| Cow position: | chr20:35104312-35104562 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 159, 0 |
| Conread position: | 121-478 |
| Cow position: | chr20:3684170-3684524 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 0 |
| Conread position: | 121-489 |
| Cow position: | chr20:27869515-27869147 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-489 |
| Cow position: | chr20:35119887-35119523 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 37 |
| Conread position: | 122-414 |
| Cow position: | chr20:37579742-37579463 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 155, 67 |
| Conread position: | 123-481 |
| Cow position: | chr20:15947064-15947435 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 122 |
| Conread position: | 126-456 |
| Cow position: | chr20:19438253-19437932 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 126-481 |
| Cow position: | chr20:3033374-3033020 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 349, 0 |
| Conread position: | 126-488 |
| Cow position: | chr20:23469353-23469708 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 126-489 |
| Cow position: | chr20:823080-822717 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 127-489 |
| Cow position: | chr20:29948811-29948449 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-489 |
| Cow position: | chr20:21914626-21914276 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 54 |
| Conread position: | 247-481 |
| Cow position: | chr20:11678918-11679152 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 342-484 |
| Cow position: | chr20:4799554-4799696 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.