Cow genome map
| Conread name: | Lym2-sn39_H10.f |
| Conread position: | 67-305 |
| Cow position: | chr21:359521-359287 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 67-480 |
| Cow position: | chr21:23812364-23811954 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 67-481 |
| Cow position: | chr21:2540922-2541336 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 26 |
| Conread position: | 67-489 |
| Cow position: | chr21:9892093-9891663 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 95 |
| Conread position: | 69-282 |
| Cow position: | chr21:9870231-9870022 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 69-481 |
| Cow position: | chr21:4183999-4183601 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 349, 28 |
| Conread position: | 72-409 |
| Cow position: | chr21:23861265-23860940 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 33, 118 |
| Conread position: | 97-481 |
| Cow position: | chr21:10850539-10850157 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 41 |
| Conread position: | 97-486 |
| Cow position: | chr21:4457288-4456899 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 336 |
| Conread position: | 97-488 |
| Cow position: | chr21:2883287-2883678 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 57 |
| Conread position: | 97-488 |
| Cow position: | chr21:30599464-30599850 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 185 |
| Conread position: | 97-489 |
| Cow position: | chr21:3779227-3778835 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 97-489 |
| Cow position: | chr21:10567130-10566743 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 130 |
| Conread position: | 97-489 |
| Cow position: | chr21:30562264-30561871 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 97-489 |
| Cow position: | chr21:31559194-31559585 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 195 |
| Conread position: | 97-489 |
| Cow position: | chr21:48116562-48116178 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 0 |
| Conread position: | 99-421 |
| Cow position: | chr21:4087261-4086939 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 70, 59 |
| Conread position: | 101-481 |
| Cow position: | chr21:8677903-8678283 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 115-489 |
| Cow position: | chr21:4589551-4589923 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 119-481 |
| Cow position: | chr21:2788554-2788914 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 99 |
| Conread position: | 121-476 |
| Cow position: | chr21:2476104-2476445 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 121-481 |
| Cow position: | chr21:4091086-4090726 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-481 |
| Cow position: | chr21:11453219-11453579 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-481 |
| Cow position: | chr21:34293452-34293094 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 121-481 |
| Cow position: | chr21:46916025-46915664 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 339, 0 |
| Conread position: | 121-482 |
| Cow position: | chr21:35596803-35596444 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 121-489 |
| Cow position: | chr21:146359-145988 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 337, 114 |
| Conread position: | 121-489 |
| Cow position: | chr21:27282822-27282456 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 169 |
| Conread position: | 121-489 |
| Cow position: | chr21:40271239-40271608 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 126-481 |
| Cow position: | chr21:6339998-6339643 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-481 |
| Cow position: | chr21:11506028-11505664 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 126-481 |
| Cow position: | chr21:39425495-39425140 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 268 |
| Conread position: | 126-489 |
| Cow position: | chr21:12055569-12055931 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 0 |
| Conread position: | 126-489 |
| Cow position: | chr21:26638033-26638396 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 127-480 |
| Cow position: | chr21:2416650-2416313 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 49 |
| Conread position: | 137-481 |
| Cow position: | chr21:37045331-37044990 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 0 |
| Conread position: | 179-481 |
| Cow position: | chr21:3426864-3426562 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 294-481 |
| Cow position: | chr21:33251656-33251469 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 301-481 |
| Cow position: | chr21:2716425-2716606 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 317-481 |
| Cow position: | chr21:3615534-3615369 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 322-489 |
| Cow position: | chr21:26818785-26818952 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.