Cow genome map
| Conread name: | Lym2-sn39_H10.f |
| Conread position: | 67-487 |
| Cow position: | chr4:21337956-21338361 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 17 |
| Conread position: | 67-488 |
| Cow position: | chr4:46664243-46663827 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 67-489 |
| Cow position: | chr4:8598107-8598519 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 67-489 |
| Cow position: | chr4:60264517-60264935 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 69-384 |
| Cow position: | chr4:11385004-11384692 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 53, 10 |
| Conread position: | 71-481 |
| Cow position: | chr4:968996-969401 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 271 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 53, 17 |
| Conread position: | 97-489 |
| Cow position: | chr4:355930-355539 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 97-489 |
| Cow position: | chr4:43319625-43320007 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 124 |
| Conread position: | 97-489 |
| Cow position: | chr4:48026417-48026027 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 99-481 |
| Cow position: | chr4:66178969-66179351 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 100-393 |
| Cow position: | chr4:15194071-15193775 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 172, 92 |
| Conread position: | 100-489 |
| Cow position: | chr4:17926237-17926625 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 354, 0 |
| Conread position: | 101-489 |
| Cow position: | chr4:16359901-16359512 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 106-489 |
| Cow position: | chr4:34184870-34185238 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 90 |
| Conread position: | 108-489 |
| Cow position: | chr4:57979638-57979260 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 92 |
| Conread position: | 109-489 |
| Cow position: | chr4:18516906-18516525 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 113-489 |
| Cow position: | chr4:13492581-13492205 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 143 |
| Conread position: | 121-481 |
| Cow position: | chr4:602990-602631 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 0 |
| Conread position: | 121-481 |
| Cow position: | chr4:6268631-6268991 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 72 |
| Conread position: | 121-481 |
| Cow position: | chr4:11618847-11618494 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 121-481 |
| Cow position: | chr4:13548026-13547665 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 0 |
| Conread position: | 121-481 |
| Cow position: | chr4:47717610-47717969 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 66 |
| Conread position: | 121-489 |
| Cow position: | chr4:12241221-12241590 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 0 |
| Conread position: | 121-489 |
| Cow position: | chr4:36896364-36896003 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 121-489 |
| Cow position: | chr4:41331435-41331070 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 295 |
| Conread position: | 121-489 |
| Cow position: | chr4:45049302-45049669 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 121-489 |
| Cow position: | chr4:65223537-65223905 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-478 |
| Cow position: | chr4:158507-158155 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-481 |
| Cow position: | chr4:1930632-1930986 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 0 |
| Conread position: | 126-481 |
| Cow position: | chr4:5880157-5879808 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 0 |
| Conread position: | 126-481 |
| Cow position: | chr4:16056593-16056241 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 126-481 |
| Cow position: | chr4:18424533-18424883 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 0 |
| Conread position: | 126-481 |
| Cow position: | chr4:27333427-27333081 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 127-481 |
| Cow position: | chr4:32212159-32211804 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 127-489 |
| Cow position: | chr4:43881100-43880738 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 156 |
| Conread position: | 127-489 |
| Cow position: | chr4:44725075-44724712 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 130-481 |
| Cow position: | chr4:47764183-47764533 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 140-488 |
| Cow position: | chr4:41119991-41119643 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-489 |
| Cow position: | chr4:3961569-3961221 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 0 |
| Conread position: | 140-489 |
| Cow position: | chr4:25599641-25599989 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 0 |
| Conread position: | 151-489 |
| Cow position: | chr4:528960-528622 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 151-489 |
| Cow position: | chr4:29531748-29532085 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 174-489 |
| Cow position: | chr4:4906090-4905783 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 256, 0 |
| Conread position: | 297-489 |
| Cow position: | chr4:31669129-31668943 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
Show alignments to all cow chromosomes.