Cow genome map


           Conread name:
           Lym2-sn39_H10.f
        

               Conread position:
               67-280
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               17, 30
               

               Conread position:
               67-481
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               97-481
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               97-481
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               97-489
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               97-489
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 78
               

               Conread position:
               97-489
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               97-489
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               97-489
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               98-481
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               100-481
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               100-489
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 321
               

               Conread position:
               100-489
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               103-481
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 0
               

               Conread position:
               106-484
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 114
               

               Conread position:
               109-481
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 220
               

               Conread position:
               110-481
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               116-481
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               116-481
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 172
               

               Conread position:
               116-481
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               117-481
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 191
               

               Conread position:
               119-481
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 0
               

               Conread position:
               119-489
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 307
               

               Conread position:
               121-481
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-481
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               121-481
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-481
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 0
               

               Conread position:
               121-481
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 135
               

               Conread position:
               121-481
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               121-489
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               126-479
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 0
               

               Conread position:
               126-480
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               126-480
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               126-481
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               126-481
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               126-481
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               126-481
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 0
               

               Conread position:
               126-481
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 344
               

               Conread position:
               126-481
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 0
               

               Conread position:
               126-489
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 169
               

               Conread position:
               127-481
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               127-489
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               130-481
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               140-489
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               165-481
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               166-489
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 43
               

               Conread position:
               169-489
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               206-481
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               214-481
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 150
               

               Conread position:
               228-481
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               235-481
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               256-489
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               175
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               261-481
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               290-481
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               296-489
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               319-481
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.