Cow genome map
| Conread name: | Lym2-sn39_H10.f |
| Conread position: | 67-295 |
| Cow position: | chr7:53991128-53990901 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 67-339 |
| Cow position: | chr7:49291039-49290765 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 67-467 |
| Cow position: | chr7:39107862-39108252 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 10 |
| Conread position: | 67-481 |
| Cow position: | chr7:21310583-21310172 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 69-427 |
| Cow position: | chr7:47051059-47050705 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 232 |
| Conread position: | 69-489 |
| Cow position: | chr7:27539990-27540402 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 70-388 |
| Cow position: | chr7:29470494-29470179 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 25 |
| Conread position: | 97-481 |
| Cow position: | chr7:45948804-45949186 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 102 |
| Conread position: | 97-488 |
| Cow position: | chr7:21234664-21235055 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 78 |
| Conread position: | 97-489 |
| Cow position: | chr7:446283-446676 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 97-489 |
| Cow position: | chr7:1372304-1372697 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 97-489 |
| Cow position: | chr7:13537236-13537628 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 124 |
| Conread position: | 97-489 |
| Cow position: | chr7:34149446-34149047 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 286 |
| Conread position: | 97-489 |
| Cow position: | chr7:34486262-34485863 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 330 |
| Conread position: | 98-460 |
| Cow position: | chr7:68857765-68858126 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 245 |
| Conread position: | 99-416 |
| Cow position: | chr7:68478786-68478473 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 100-256 |
| Cow position: | chr7:54195913-54196069 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 100-452 |
| Cow position: | chr7:27126499-27126155 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 306, 95 |
| Conread position: | 100-481 |
| Cow position: | chr7:1610867-1611245 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 0 |
| Conread position: | 100-484 |
| Cow position: | chr7:19048553-19048927 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 24, 89 |
| Conread position: | 100-489 |
| Cow position: | chr7:5662719-5662335 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 91 |
| Conread position: | 100-489 |
| Cow position: | chr7:27786966-27786579 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 55 |
| Conread position: | 100-489 |
| Cow position: | chr7:35287216-35287605 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 102 |
| Conread position: | 101-489 |
| Cow position: | chr7:55537575-55537962 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 110-489 |
| Cow position: | chr7:33405908-33406287 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 149 |
| Conread position: | 110-489 |
| Cow position: | chr7:54603187-54602806 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 112-393 |
| Cow position: | chr7:68908159-68907881 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 119-455 |
| Cow position: | chr7:39792080-39791744 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 119-489 |
| Cow position: | chr7:19924502-19924859 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 119-489 |
| Cow position: | chr7:58993519-58993154 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 247 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 164, 179 |
| Conread position: | 121-390 |
| Cow position: | chr7:5183728-5183459 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-480 |
| Cow position: | chr7:26894091-26893714 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 121-481 |
| Cow position: | chr7:21320479-21320119 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-481 |
| Cow position: | chr7:21975424-21975774 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 121-481 |
| Cow position: | chr7:23815647-23816007 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-481 |
| Cow position: | chr7:35296947-35297308 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 121-481 |
| Cow position: | chr7:61559536-61559176 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-488 |
| Cow position: | chr7:64241625-64241986 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 310 |
| Conread position: | 121-489 |
| Cow position: | chr7:8144921-8145285 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 0 |
| Conread position: | 121-489 |
| Cow position: | chr7:21127340-21127702 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 121-489 |
| Cow position: | chr7:21985722-21985354 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-489 |
| Cow position: | chr7:68479490-68479122 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 122-387 |
| Cow position: | chr7:52804396-52804657 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 159, 64 |
| Conread position: | 122-489 |
| Cow position: | chr7:39555774-39556140 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 29 |
| Conread position: | 125-409 |
| Cow position: | chr7:68777837-68778119 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 37 |
| Conread position: | 125-427 |
| Cow position: | chr7:58377891-58378184 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 223, 0 |
| Conread position: | 126-481 |
| Cow position: | chr7:3234365-3234720 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-481 |
| Cow position: | chr7:3300838-3301191 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 126-481 |
| Cow position: | chr7:6642559-6642915 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 126-481 |
| Cow position: | chr7:6648338-6648692 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 126-481 |
| Cow position: | chr7:20528357-20528712 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-481 |
| Cow position: | chr7:20556032-20555677 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-481 |
| Cow position: | chr7:20799128-20799479 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 127-489 |
| Cow position: | chr7:14139283-14139641 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 289 |
| Conread position: | 140-481 |
| Cow position: | chr7:10431114-10431455 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 140-489 |
| Cow position: | chr7:24808163-24808512 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 142-481 |
| Cow position: | chr7:1357384-1357718 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 0 |
| Conread position: | 148-481 |
| Cow position: | chr7:41869650-41869982 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 153-479 |
| Cow position: | chr7:33878080-33878400 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 182-489 |
| Cow position: | chr7:27101852-27102159 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 194-481 |
| Cow position: | chr7:26026285-26026002 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 211-481 |
| Cow position: | chr7:6489086-6489347 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 174 |
| Conread position: | 279-481 |
| Cow position: | chr7:47375162-47374960 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 297-481 |
| Cow position: | chr7:68435898-68436082 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 108, 89 |
Show alignments to all cow chromosomes.