Cow genome map
| Conread name: | Lym2-sn39_H10.f |
| Conread position: | 46-489 |
| Cow position: | chr9:59482435-59482878 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 319 |
| Conread position: | 67-256 |
| Cow position: | chr9:3803258-3803069 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 67-360 |
| Cow position: | chr9:39040786-39040497 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 17, 90 |
| Conread position: | 67-455 |
| Cow position: | chr9:13477006-13477379 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 17 |
| Conread position: | 67-475 |
| Cow position: | chr9:64119035-64118636 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 120 |
| Conread position: | 67-477 |
| Cow position: | chr9:3355775-3356181 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 336 |
| Conread position: | 69-320 |
| Cow position: | chr9:20309321-20309568 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 83-484 |
| Cow position: | chr9:37129343-37129737 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 113 |
| Conread position: | 88-427 |
| Cow position: | chr9:64159315-64158971 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 246 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 97-481 |
| Cow position: | chr9:6050862-6051247 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 97-481 |
| Cow position: | chr9:59455412-59455796 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 357 |
| Conread position: | 97-489 |
| Cow position: | chr9:2171243-2170850 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 34 |
| Conread position: | 97-489 |
| Cow position: | chr9:4532678-4532289 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 97-489 |
| Cow position: | chr9:16175954-16175562 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 210 |
| Conread position: | 97-489 |
| Cow position: | chr9:31807720-31807328 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 98 |
| Conread position: | 97-489 |
| Cow position: | chr9:37971024-37971412 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 0 |
| Conread position: | 97-489 |
| Cow position: | chr9:60277835-60278227 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 180 |
| Conread position: | 99-481 |
| Cow position: | chr9:3156207-3155835 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 99-481 |
| Cow position: | chr9:28625856-28626238 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 96 |
| Conread position: | 100-325 |
| Cow position: | chr9:44818042-44817817 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 100-481 |
| Cow position: | chr9:31021006-31020611 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 101-481 |
| Cow position: | chr9:9054881-9055263 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 101-489 |
| Cow position: | chr9:7061909-7062298 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 106-477 |
| Cow position: | chr9:34992569-34992188 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 24 |
| Conread position: | 108-489 |
| Cow position: | chr9:3542982-3542605 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 307, 0 |
| Conread position: | 110-489 |
| Cow position: | chr9:30672541-30672163 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 0 |
| Conread position: | 111-489 |
| Cow position: | chr9:9013280-9012899 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 117-479 |
| Cow position: | chr9:10315533-10315173 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 93 |
| Conread position: | 121-346 |
| Cow position: | chr9:37095357-37095132 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 48, 37 |
| Conread position: | 121-481 |
| Cow position: | chr9:25484035-25483676 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 121-481 |
| Cow position: | chr9:34242435-34242795 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 154 |
| Conread position: | 121-481 |
| Cow position: | chr9:45873511-45873151 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-481 |
| Cow position: | chr9:50789841-50789480 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 179 |
| Conread position: | 121-484 |
| Cow position: | chr9:37063641-37063995 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 121-489 |
| Cow position: | chr9:1995752-1996118 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 121-489 |
| Cow position: | chr9:25023139-25023507 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-489 |
| Cow position: | chr9:29628585-29628952 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 121-489 |
| Cow position: | chr9:42309845-42309477 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 121-489 |
| Cow position: | chr9:59536257-59535892 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 295 |
| Conread position: | 122-481 |
| Cow position: | chr9:3006084-3006443 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 122-489 |
| Cow position: | chr9:59173998-59174362 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 210 |
| Conread position: | 123-481 |
| Cow position: | chr9:15072674-15072319 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 0 |
| Conread position: | 126-481 |
| Cow position: | chr9:780647-781003 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 0 |
| Conread position: | 126-481 |
| Cow position: | chr9:17064226-17064595 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 126-481 |
| Cow position: | chr9:25755066-25755421 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-481 |
| Cow position: | chr9:27934246-27933897 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 126-481 |
| Cow position: | chr9:28678130-28677778 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 0 |
| Conread position: | 126-481 |
| Cow position: | chr9:30826839-30826484 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-481 |
| Cow position: | chr9:31194009-31194364 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 126-489 |
| Cow position: | chr9:1076040-1076404 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 127-452 |
| Cow position: | chr9:16268528-16268203 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 133-489 |
| Cow position: | chr9:3548023-3548378 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 20 |
| Conread position: | 135-489 |
| Cow position: | chr9:27034849-27034501 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 74 |
| Conread position: | 140-481 |
| Cow position: | chr9:3566709-3567050 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 260 |
| Conread position: | 147-481 |
| Cow position: | chr9:792377-792711 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 113 |
| Conread position: | 160-489 |
| Cow position: | chr9:37162683-37163013 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 0 |
| Conread position: | 175-481 |
| Cow position: | chr9:1251867-1252165 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 180-489 |
| Cow position: | chr9:28021654-28021342 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 185-481 |
| Cow position: | chr9:222449-222746 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 103, 63 |
| Conread position: | 190-481 |
| Cow position: | chr9:4672700-4672410 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 209-489 |
| Cow position: | chr9:29028151-29028434 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 253-479 |
| Cow position: | chr9:2200137-2199911 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 306-488 |
| Cow position: | chr9:6830580-6830762 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 312-489 |
| Cow position: | chr9:7002524-7002347 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.