Cow genome map

Conread name: Lym2-sn39_H10.f

Conread position: 48-481
Cow position:
Alignm length: 437
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 6

Conread position: 67-393
Cow position:
Alignm length: 332
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 26

Conread position: 67-481
Cow position:
Alignm length: 420
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 26

Conread position: 69-405
Cow position:
Alignm length: 339
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 14

Conread position: 96-489
Cow position:
Alignm length: 394
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 97-480
Cow position:
Alignm length: 386
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 22

Conread position: 97-481
Cow position:
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 312

Conread position: 97-489
Cow position:
Alignm length: 393
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 97-489
Cow position:
Alignm length: 393
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 97-489
Cow position:
Alignm length: 394
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 123

Conread position: 97-489
Cow position:
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position:
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 97-489
Cow position:
Alignm length: 396
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 102

Conread position: 98-489
Cow position:
Alignm length: 394
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 25

Conread position: 99-481
Cow position:
Alignm length: 383
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 100-479
Cow position:
Alignm length: 383
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 75

Conread position: 100-489
Cow position:
Alignm length: 393
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 100-489
Cow position:
Alignm length: 390
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 0

Conread position: 100-489
Cow position:
Alignm length: 392
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 306

Conread position: 101-488
Cow position:
Alignm length: 389
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 206

Conread position: 102-480
Cow position:
Alignm length: 379
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 103-481
Cow position:
Alignm length: 379
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 103-489
Cow position:
Alignm length: 387
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 110-481
Cow position:
Alignm length: 373
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 110-481
Cow position:
Alignm length: 372
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 110-481
Cow position:
Alignm length: 373
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 9

Conread position: 112-481
Cow position:
Alignm length: 370
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 0

Conread position: 113-489
Cow position:
Alignm length: 378
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 116-481
Cow position:
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 117-481
Cow position:
Alignm length: 366
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 62

Conread position: 119-417
Cow position:
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 119-489
Cow position:
Alignm length: 373
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 0

Conread position: 119-489
Cow position:
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-456
Cow position:
Alignm length: 338
Alignm identity: 228
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 29, 22

Conread position: 121-481
Cow position:
Alignm length: 361
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position:
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 0

Conread position: 121-481
Cow position:
Alignm length: 368
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 125

Conread position: 121-481
Cow position:
Alignm length: 361
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position:
Alignm length: 361
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 121-481
Cow position:
Alignm length: 361
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position:
Alignm length: 361
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 121-481
Cow position:
Alignm length: 362
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 0

Conread position: 121-481
Cow position:
Alignm length: 361
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 121-481
Cow position:
Alignm length: 361
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-481
Cow position:
Alignm length: 361
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position:
Alignm length: 369
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 121-489
Cow position:
Alignm length: 369
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 121-489
Cow position:
Alignm length: 370
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 313

Conread position: 121-489
Cow position:
Alignm length: 370
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 32

Conread position: 121-489
Cow position:
Alignm length: 371
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 122-479
Cow position:
Alignm length: 358
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 122-489
Cow position:
Alignm length: 368
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 123-359
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 71, 87

Conread position: 123-481
Cow position:
Alignm length: 359
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 0

Conread position: 123-481
Cow position:
Alignm length: 359
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-469
Cow position:
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-478
Cow position:
Alignm length: 353
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-479
Cow position:
Alignm length: 354
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position:
Alignm length: 357
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 59

Conread position: 126-481
Cow position:
Alignm length: 356
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 0

Conread position: 126-481
Cow position:
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 0

Conread position: 126-481
Cow position:
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 0

Conread position: 126-481
Cow position:
Alignm length: 356
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position:
Alignm length: 356
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 0

Conread position: 126-481
Cow position:
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position:
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 0

Conread position: 126-481
Cow position:
Alignm length: 356
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 0

Conread position: 126-481
Cow position:
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position:
Alignm length: 356
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 0

Conread position: 126-481
Cow position:
Alignm length: 357
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 139

Conread position: 126-481
Cow position:
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position:
Alignm length: 357
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 220, 209

Conread position: 126-481
Cow position:
Alignm length: 356
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position:
Alignm length: 356
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 126-481
Cow position:
Alignm length: 356
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-481
Cow position:
Alignm length: 356
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 126-481
Cow position:
Alignm length: 356
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 306, 0

Conread position: 126-489
Cow position:
Alignm length: 364
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-489
Cow position:
Alignm length: 364
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 126-489
Cow position:
Alignm length: 366
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 126-489
Cow position:
Alignm length: 364
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 127-481
Cow position:
Alignm length: 356
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 292

Conread position: 130-481
Cow position:
Alignm length: 352
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 140-489
Cow position:
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 143-489
Cow position:
Alignm length: 347
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 159-489
Cow position:
Alignm length: 331
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 0

Conread position: 165-481
Cow position:
Alignm length: 317
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 165-481
Cow position:
Alignm length: 318
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 0

Conread position: 165-481
Cow position:
Alignm length: 317
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 165-489
Cow position:
Alignm length: 328
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 253

Conread position: 182-489
Cow position:
Alignm length: 310
Alignm identity: 207
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 61, 18

Conread position: 198-488
Cow position:
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 0

Conread position: 207-481
Cow position:
Alignm length: 275
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 210-481
Cow position:
Alignm length: 277
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 211-463
Cow position:
Alignm length: 253
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 246-481
Cow position:
Alignm length: 236
Alignm identity: 167
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 171, 0

Conread position: 253-481
Cow position:
Alignm length: 229
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 0

Conread position: 258-481
Cow position:
Alignm length: 224
Alignm identity: 161
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 132, 0

Conread position: 276-481
Cow position:
Alignm length: 207
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 12, 66

Conread position: 311-479
Cow position:
Alignm length: 169
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.