Cow genome map
| Conread name: | Lym2-sn47_F07.f |
| Conread position: | 90-218 |
| Cow position: | chr1:26518389-26518518 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 90-327 |
| Cow position: | chr1:30519185-30518948 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 197, 68 |
| Conread position: | 91-382 |
| Cow position: | chr1:44100868-44101165 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 41, 32 |
| Conread position: | 92-268 |
| Cow position: | chr1:73070560-73070736 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 145 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 69, 158 |
| Conread position: | 93-214 |
| Cow position: | chr1:5502460-5502338 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 93-240 |
| Cow position: | chr1:24651774-24651625 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 93-244 |
| Cow position: | chr1:66999517-66999363 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-256 |
| Cow position: | chr1:34692714-34692557 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 93-262 |
| Cow position: | chr1:31418023-31418191 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 65, 51 |
| Conread position: | 93-264 |
| Cow position: | chr1:93855016-93854845 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 68, 148 |
| Conread position: | 93-265 |
| Cow position: | chr1:17941293-17941465 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 68, 136 |
| Conread position: | 93-266 |
| Cow position: | chr1:68607049-68607221 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 51, 26 |
| Conread position: | 93-267 |
| Cow position: | chr1:48246326-48246165 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 93-267 |
| Cow position: | chr1:82923684-82923859 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-268 |
| Cow position: | chr1:12061722-12061893 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 68, 15 |
| Conread position: | 93-268 |
| Cow position: | chr1:28873569-28873394 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 146 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 68, 149 |
| Conread position: | 93-268 |
| Cow position: | chr1:30534529-30534704 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 145 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-268 |
| Cow position: | chr1:33551419-33551244 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 68, 165 |
| Conread position: | 93-268 |
| Cow position: | chr1:42736946-42736772 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 146 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 68, 136 |
| Conread position: | 93-268 |
| Cow position: | chr1:52358783-52358957 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 67, 63 |
| Conread position: | 93-268 |
| Cow position: | chr1:57366633-57366812 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 47, 153 |
| Conread position: | 93-268 |
| Cow position: | chr1:58336330-58336155 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 146 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-268 |
| Cow position: | chr1:62244151-62244327 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 149 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 68, 138 |
| Conread position: | 93-268 |
| Cow position: | chr1:65386821-65386648 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 65, 119 |
| Conread position: | 93-268 |
| Cow position: | chr1:69403475-69403300 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 145 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-268 |
| Cow position: | chr1:76545046-76545218 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 69, 136 |
| Conread position: | 93-268 |
| Cow position: | chr1:79456478-79456652 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 68, 155 |
| Conread position: | 93-268 |
| Cow position: | chr1:85882487-85882322 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 93-268 |
| Cow position: | chr1:91892627-91892803 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 146 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 49, 158 |
| Conread position: | 93-268 |
| Cow position: | chr1:94660167-94660002 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 93-268 |
| Cow position: | chr1:99913912-99913737 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 146 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 49, 137 |
| Conread position: | 93-269 |
| Cow position: | chr1:31365594-31365765 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 65, 152 |
| Conread position: | 93-269 |
| Cow position: | chr1:56143843-56144018 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 65, 45 |
| Conread position: | 93-274 |
| Cow position: | chr1:69921943-69922126 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-275 |
| Cow position: | chr1:3385527-3385708 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 68, 29 |
| Conread position: | 93-275 |
| Cow position: | chr1:8825544-8825362 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 93-275 |
| Cow position: | chr1:25179538-25179718 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 148 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 65, 128 |
| Conread position: | 93-275 |
| Cow position: | chr1:49973696-49973878 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 68, 149 |
| Conread position: | 93-275 |
| Cow position: | chr1:58883573-58883755 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 68, 160 |
| Conread position: | 93-275 |
| Cow position: | chr1:72081272-72081091 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 65, 97 |
| Conread position: | 93-275 |
| Cow position: | chr1:97226216-97226399 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-283 |
| Cow position: | chr1:72981762-72981573 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-283 |
| Cow position: | chr1:85780285-85780474 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 153 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 68, 136 |
| Conread position: | 93-284 |
| Cow position: | chr1:76752158-76752350 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 154 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-294 |
| Cow position: | chr1:18013008-18013209 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 69, 134 |
| Conread position: | 93-294 |
| Cow position: | chr1:63605284-63605484 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 162 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 65, 158 |
| Conread position: | 93-324 |
| Cow position: | chr1:72186385-72186617 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-369 |
| Cow position: | chr1:55321652-55321934 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 93-376 |
| Cow position: | chr1:29609175-29609457 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 62, 41 |
| Conread position: | 93-399 |
| Cow position: | chr1:67287317-67287016 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 58 |
| Conread position: | 93-403 |
| Cow position: | chr1:40512550-40512869 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 71 |
| Conread position: | 94-419 |
| Cow position: | chr1:88269716-88270049 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 43, 286 |
| Conread position: | 95-245 |
| Cow position: | chr1:60339791-60339641 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 66, 45 |
| Conread position: | 95-245 |
| Cow position: | chr1:89426060-89425909 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 95-268 |
| Cow position: | chr1:88131264-88131091 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 143 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 66, 155 |
| Conread position: | 96-203 |
| Cow position: | chr1:91750977-91751085 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 96-224 |
| Cow position: | chr1:59209665-59209794 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 96-267 |
| Cow position: | chr1:29034782-29034616 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 105 |
| Conread position: | 96-275 |
| Cow position: | chr1:33712557-33712376 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 65, 7 |
| Conread position: | 96-285 |
| Cow position: | chr1:21999465-21999655 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 157 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 154 |
| Conread position: | 96-394 |
| Cow position: | chr1:29033609-29033302 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 65, 157 |
| Conread position: | 97-267 |
| Cow position: | chr1:86698727-86698897 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 58, 132 |
| Conread position: | 97-286 |
| Cow position: | chr1:102549727-102549536 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 35, 13 |
| Conread position: | 98-218 |
| Cow position: | chr1:56164033-56163913 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 63, 78 |
| Conread position: | 98-243 |
| Cow position: | chr1:61309495-61309349 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-258 |
| Cow position: | chr1:5355610-5355449 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-258 |
| Cow position: | chr1:29362781-29362619 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 98-258 |
| Cow position: | chr1:30283059-30283220 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-258 |
| Cow position: | chr1:31397174-31397013 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-264 |
| Cow position: | chr1:17036075-17036242 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 151, 60 |
| Conread position: | 98-265 |
| Cow position: | chr1:53199033-53198864 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-266 |
| Cow position: | chr1:9382068-9382233 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 40 |
| Conread position: | 98-266 |
| Cow position: | chr1:20829373-20829204 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-266 |
| Cow position: | chr1:33851769-33851592 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-266 |
| Cow position: | chr1:39544254-39544084 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 98-266 |
| Cow position: | chr1:40574697-40574528 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-266 |
| Cow position: | chr1:57424356-57424524 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 112 |
| Conread position: | 98-266 |
| Cow position: | chr1:67834657-67834826 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-266 |
| Cow position: | chr1:80358697-80358866 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-266 |
| Cow position: | chr1:82564987-82564818 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 98-266 |
| Cow position: | chr1:82912660-82912829 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-266 |
| Cow position: | chr1:85792166-85792001 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 40 |
| Conread position: | 98-267 |
| Cow position: | chr1:8554811-8554641 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 63, 92 |
| Conread position: | 98-267 |
| Cow position: | chr1:18879909-18880080 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-267 |
| Cow position: | chr1:40053838-40053668 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 63, 40 |
| Conread position: | 98-268 |
| Cow position: | chr1:17012255-17012426 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-268 |
| Cow position: | chr1:40684213-40684378 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 60, 88 |
| Conread position: | 98-268 |
| Cow position: | chr1:95239853-95239682 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-269 |
| Cow position: | chr1:28711400-28711229 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 63, 162 |
| Conread position: | 98-269 |
| Cow position: | chr1:56490334-56490161 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-275 |
| Cow position: | chr1:79636447-79636622 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 98-279 |
| Cow position: | chr1:71562089-71562270 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 63, 163 |
| Conread position: | 101-207 |
| Cow position: | chr1:18242852-18242959 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 101-266 |
| Cow position: | chr1:21087894-21087728 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 101-266 |
| Cow position: | chr1:56723636-56723469 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 101-266 |
| Cow position: | chr1:91899477-91899311 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 101-268 |
| Cow position: | chr1:102434552-102434719 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 60, 149 |
| Conread position: | 102-266 |
| Cow position: | chr1:11291626-11291791 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 102-266 |
| Cow position: | chr1:69766942-69766777 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 102-298 |
| Cow position: | chr1:89770177-89770378 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 149 |
| Conread position: | 103-244 |
| Cow position: | chr1:13450683-13450543 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 104-395 |
| Cow position: | chr1:78361627-78361336 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 25, 11 |
| Conread position: | 105-459 |
| Cow position: | chr1:21720693-21720347 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 108-214 |
| Cow position: | chr1:76622427-76622534 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 110-266 |
| Cow position: | chr1:82653125-82652968 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 113-457 |
| Cow position: | chr1:67327789-67328132 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 23, 5 |
| Conread position: | 114-275 |
| Cow position: | chr1:1460861-1461020 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 83, 6 |
| Conread position: | 114-292 |
| Cow position: | chr1:45019406-45019580 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 44, 20 |
| Conread position: | 118-283 |
| Cow position: | chr1:18027301-18027463 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 43, 19 |
| Conread position: | 122-399 |
| Cow position: | chr1:22344383-22344116 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 39, 90 |
| Conread position: | 123-270 |
| Cow position: | chr1:56193467-56193615 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 38, 128 |
| Conread position: | 129-423 |
| Cow position: | chr1:38386895-38387185 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 59, 9 |
| Conread position: | 131-374 |
| Cow position: | chr1:72137459-72137203 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 30, 87 |
| Conread position: | 132-266 |
| Cow position: | chr1:28723330-28723195 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 9 |
| Conread position: | 141-266 |
| Cow position: | chr1:69537345-69537218 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 141-271 |
| Cow position: | chr1:62853407-62853536 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 141-276 |
| Cow position: | chr1:97124255-97124119 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 17, 26 |
| Conread position: | 142-449 |
| Cow position: | chr1:25886316-25886618 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 25, 74 |
| Conread position: | 145-268 |
| Cow position: | chr1:57568396-57568272 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 147-275 |
| Cow position: | chr1:59674892-59674762 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 148-266 |
| Cow position: | chr1:87206987-87207107 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 176-387 |
| Cow position: | chr1:58179293-58179502 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 93, 184 |
| Conread position: | 190-423 |
| Cow position: | chr1:29413751-29413984 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 129, 38 |
Show alignments to all cow chromosomes.