Cow genome map


           Conread name:
           Lym2-sn47_F07.f
        

               Conread position:
               92-265
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               29, 160
               

               Conread position:
               92-299
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               66, 34
               

               Conread position:
               93-204
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-210
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-222
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-233
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               68, 39
               

               Conread position:
               93-259
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 117
               

               Conread position:
               93-266
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               93-266
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               147
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               65, 97
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-269
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               147
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               65, 114
               

               Conread position:
               93-283
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-283
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               153
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-293
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               65, 105
               

               Conread position:
               93-301
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               165
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-363
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               38, 68
               

               Conread position:
               93-385
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               65, 213
               

               Conread position:
               93-387
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               124, 40
               

               Conread position:
               93-394
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-397
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               221
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               152, 65
               

               Conread position:
               93-403
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               226, 59
               

               Conread position:
               93-436
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               65, 150
               

               Conread position:
               93-459
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 182
               

               Conread position:
               96-258
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               65, 5
               

               Conread position:
               96-258
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-266
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-275
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               31, 104
               

               Conread position:
               96-328
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               62, 77
               

               Conread position:
               96-397
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 62
               

               Conread position:
               97-269
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               64, 51
               

               Conread position:
               98-223
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-224
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 86
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               100-215
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 46
               

               Conread position:
               100-258
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               61, 92
               

               Conread position:
               101-245
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-266
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               102-266
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               59, 11
               

               Conread position:
               102-386
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 234
               

               Conread position:
               102-386
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               55, 36
               

               Conread position:
               103-266
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               58, 92
               

               Conread position:
               104-276
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               92, 54
               

               Conread position:
               105-399
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 148
               

               Conread position:
               110-245
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               121-397
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 17
               

               Conread position:
               127-369
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               128, 31
               

               Conread position:
               129-341
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               160, 127
               

               Conread position:
               129-342
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               160, 16
               

               Conread position:
               129-437
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               14, 261
               

               Conread position:
               130-268
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               10, 121
               

               Conread position:
               131-292
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               30, 51
               

               Conread position:
               132-384
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 16
               

               Conread position:
               133-275
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               134-268
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               27, 40
               

               Conread position:
               141-259
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               141-275
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 7
               

               Conread position:
               141-285
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               17, 5
               

               Conread position:
               148-269
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               209-403
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 20
               

               Conread position:
               249-398
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 21
               
Show alignments to all cow chromosomes.