Cow genome map

Conread name: Lym2-sn47_F07.f

Conread position: 92-265
Cow position: chr10:29846130-29846305 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 145
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 29, 160

Conread position: 92-299
Cow position: chr10:24977247-24977454 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 66, 34

Conread position: 93-204
Cow position: chr10:14335329-14335441 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 93-210
Cow position: chr10:1377759-1377641 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 93-222
Cow position: chr10:37770884-37770754 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 93-233
Cow position: chr10:19715053-19715190 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 68, 39

Conread position: 93-259
Cow position: chr10:2120495-2120660 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 65, 117

Conread position: 93-266
Cow position: chr10:55093778-55093603 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 93-266
Cow position: chr10:57989475-57989648 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 68, 157

Conread position: 93-268
Cow position: chr10:8290495-8290322 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 147
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 65, 97

Conread position: 93-268
Cow position: chr10:16926049-16925879 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 68, 136

Conread position: 93-268
Cow position: chr10:21487434-21487259 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 65, 157

Conread position: 93-268
Cow position: chr10:62408332-62408507 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 68, 157

Conread position: 93-269
Cow position: chr10:54978735-54978910 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 147
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 0

Conread position: 93-275
Cow position: chr10:7281576-7281758 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 68, 157

Conread position: 93-275
Cow position: chr10:30684996-30685177 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 148
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 65, 114

Conread position: 93-283
Cow position: chr10:38344842-38345032 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 154
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 68, 157

Conread position: 93-283
Cow position: chr10:38537985-38538175 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 153
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 68, 157

Conread position: 93-293
Cow position: chr10:22101751-22101556 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 65, 105

Conread position: 93-301
Cow position: chr10:17432738-17432950 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 68, 0

Conread position: 93-363
Cow position: chr10:8326778-8327039 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 38, 68

Conread position: 93-385
Cow position: chr10:26597131-26596826 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 65, 213

Conread position: 93-387
Cow position: chr10:54965603-54965890 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 124, 40

Conread position: 93-394
Cow position: chr10:44294401-44294684 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 65, 0

Conread position: 93-397
Cow position: chr10:3542711-3543016 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 221
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 152, 65

Conread position: 93-403
Cow position: chr10:15860403-15860696 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 226, 59

Conread position: 93-436
Cow position: chr10:41388594-41388938 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 230
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 150

Conread position: 93-459
Cow position: chr10:31524618-31524263 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 182

Conread position: 96-258
Cow position: chr10:21740244-21740406 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 65, 5

Conread position: 96-258
Cow position: chr10:28642048-28641885 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 96-266
Cow position: chr10:41157956-41157785 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 96-275
Cow position: chr10:19512122-19511942 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 147
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 31, 104

Conread position: 96-328
Cow position: chr10:39040787-39041017 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 62, 77

Conread position: 96-397
Cow position: chr10:38545399-38545691 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 62

Conread position: 97-269
Cow position: chr10:10582317-10582146 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 64, 51

Conread position: 98-223
Cow position: chr10:47907437-47907311 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 98-224
Cow position: chr10:4191731-4191858 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 98-258
Cow position: chr10:51952115-51952276 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 98-266
Cow position: chr10:21400164-21400333 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 63, 0

Conread position: 98-266
Cow position: chr10:25564754-25564920 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 98-266
Cow position: chr10:39180292-39180121 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 63, 86

Conread position: 98-266
Cow position: chr10:41567609-41567440 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 98-268
Cow position: chr10:5849119-5849290 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 98-268
Cow position: chr10:56065180-56065009 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 100-215
Cow position: chr10:39815982-39816097 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 46

Conread position: 100-258
Cow position: chr10:32578792-32578634 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 61, 92

Conread position: 101-245
Cow position: chr10:11698747-11698602 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 101-266
Cow position: chr10:19495782-19495948 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 102-266
Cow position: chr10:14804336-14804174 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 11

Conread position: 102-386
Cow position: chr10:38848222-38847935 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 234

Conread position: 102-386
Cow position: chr10:41774728-41775018 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 55, 36

Conread position: 103-266
Cow position: chr10:41877419-41877256 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 92

Conread position: 104-276
Cow position: chr10:42751483-42751305 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 92, 54

Conread position: 105-399
Cow position: chr10:14861765-14861461 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 148

Conread position: 110-245
Cow position: chr10:280132-280264 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 51, 16

Conread position: 121-397
Cow position: chr10:28930902-28931184 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 17

Conread position: 127-369
Cow position: chr10:20370750-20370982 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 128, 31

Conread position: 129-341
Cow position: chr10:42749251-42749032 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 160, 127

Conread position: 129-342
Cow position: chr10:42110814-42110599 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 160, 16

Conread position: 129-437
Cow position: chr10:32065068-32064743 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 218
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 261

Conread position: 130-268
Cow position: chr10:25359882-25359743 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 118
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 10, 121

Conread position: 131-292
Cow position: chr10:8339877-8339716 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 133
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 30, 51

Conread position: 132-384
Cow position: chr10:4717408-4717161 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 16

Conread position: 133-275
Cow position: chr10:124789-124646 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 134-268
Cow position: chr10:32651210-32651077 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 27, 40

Conread position: 141-259
Cow position: chr10:34686370-34686249 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 141-275
Cow position: chr10:62217078-62216943 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 20, 7

Conread position: 141-285
Cow position: chr10:62778819-62778674 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 5

Conread position: 148-269
Cow position: chr10:46693929-46694052 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 209-403
Cow position: chr10:42629356-42629153 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 20

Conread position: 249-398
Cow position: chr10:33347384-33347228 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 71, 21

Show alignments to all cow chromosomes.