Cow genome map
| Conread name: | Lym2-sn47_F07.f |
| Conread position: | 93-214 |
| Cow position: | chr12:8677645-8677767 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-265 |
| Cow position: | chr12:6406207-6406379 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-267 |
| Cow position: | chr12:11098684-11098512 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 148 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 93-268 |
| Cow position: | chr12:22205304-22205479 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 144 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-268 |
| Cow position: | chr12:25100618-25100792 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 68, 136 |
| Conread position: | 93-268 |
| Cow position: | chr12:28765579-28765753 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 68, 159 |
| Conread position: | 93-275 |
| Cow position: | chr12:14662188-14662372 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 93-275 |
| Cow position: | chr12:42859384-42859566 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 150 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 50, 158 |
| Conread position: | 93-283 |
| Cow position: | chr12:1402934-1402745 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 65, 157 |
| Conread position: | 93-290 |
| Cow position: | chr12:2283000-2282799 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 93-323 |
| Cow position: | chr12:21198401-21198183 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 59, 92 |
| Conread position: | 93-334 |
| Cow position: | chr12:3631424-3631665 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 183 |
| Conread position: | 96-267 |
| Cow position: | chr12:27855522-27855690 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 65, 21 |
| Conread position: | 96-401 |
| Cow position: | chr12:21500900-21500593 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 36, 43 |
| Conread position: | 98-245 |
| Cow position: | chr12:8197648-8197500 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-245 |
| Cow position: | chr12:16821907-16821759 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-258 |
| Cow position: | chr12:21427124-21426965 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 63, 40 |
| Conread position: | 98-266 |
| Cow position: | chr12:37558983-37558819 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 98-267 |
| Cow position: | chr12:43030955-43031122 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 60, 47 |
| Conread position: | 98-268 |
| Cow position: | chr12:4157809-4157638 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-268 |
| Cow position: | chr12:33986594-33986423 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 101-266 |
| Cow position: | chr12:32653972-32653807 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 60, 37 |
| Conread position: | 118-283 |
| Cow position: | chr12:27932533-27932690 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 122-265 |
| Cow position: | chr12:21254249-21254392 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 39, 128 |
| Conread position: | 133-266 |
| Cow position: | chr12:21902344-21902209 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 138-269 |
| Cow position: | chr12:21942161-21942029 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 140-269 |
| Cow position: | chr12:251665-251794 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 110 |
| Conread position: | 141-265 |
| Cow position: | chr12:8311575-8311452 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 20, 54 |
Show alignments to all cow chromosomes.