Cow genome map


           Conread name:
           Lym2-sn47_F07.f
        

               Conread position:
               90-209
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               90-279
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               71, 48
               

               Conread position:
               91-401
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 100
               

               Conread position:
               92-266
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               92-266
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               92-267
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               93-213
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-224
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-234
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-266
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               68, 164
               

               Conread position:
               93-266
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               144
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               62, 45
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               68, 26
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               68, 153
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               93-269
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-270
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               93-270
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-274
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               68, 132
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               113, 66
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-276
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-279
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               65, 87
               

               Conread position:
               93-283
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               19, 110
               

               Conread position:
               93-285
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               153
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-293
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-298
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               171, 60
               

               Conread position:
               93-315
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               50, 137
               

               Conread position:
               93-335
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-387
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               188, 58
               

               Conread position:
               93-401
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               141, 65
               

               Conread position:
               93-403
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 61
               

               Conread position:
               93-414
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               226, 28
               

               Conread position:
               96-266
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               96-266
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-267
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-275
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               62, 45
               

               Conread position:
               96-287
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               65, 35
               

               Conread position:
               96-342
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               62, 38
               

               Conread position:
               98-221
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               98-245
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 40
               

               Conread position:
               98-250
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-255
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               63, 131
               

               Conread position:
               98-258
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               63, 143
               

               Conread position:
               98-265
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               63, 114
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               63, 144
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 153
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-267
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               63, 19
               

               Conread position:
               98-269
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               98-283
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               100-275
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               58, 129
               

               Conread position:
               101-269
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               102-265
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               102-401
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               51, 105
               

               Conread position:
               103-301
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               55, 25
               

               Conread position:
               111-266
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               50, 98
               

               Conread position:
               115-386
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               117-399
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               44, 127
               

               Conread position:
               118-407
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               40, 139
               

               Conread position:
               121-265
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               121-274
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               129-269
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               136-387
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               23, 39
               

               Conread position:
               142-275
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               143-266
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               144-275
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               17, 85
               

               Conread position:
               148-266
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               148-267
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               108, 9
               

               Conread position:
               148-275
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               208-399
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               81, 173
               

               Conread position:
               208-403
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               71, 49
               
Show alignments to all cow chromosomes.