Cow genome map

Conread name: Lym2-sn47_F07.f

Conread position: 90-209
Cow position: chr15:4812705-4812585 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 90-279
Cow position: chr15:7934428-7934243 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 71, 48

Conread position: 91-401
Cow position: chr15:24794452-24794151 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 100

Conread position: 92-266
Cow position: chr15:328530-328353 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 92-266
Cow position: chr15:53339117-53338950 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 92-267
Cow position: chr15:4671533-4671354 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 93-213
Cow position: chr15:3261234-3261355 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 93-224
Cow position: chr15:35647567-35647699 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 93-234
Cow position: chr15:369061-369203 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 93-266
Cow position: chr15:56587-56407 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 68, 164

Conread position: 93-266
Cow position: chr15:19737953-19738126 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 144
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 68, 157

Conread position: 93-267
Cow position: chr15:2076747-2076574 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 62, 45

Conread position: 93-267
Cow position: chr15:17292543-17292363 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 38, 0

Conread position: 93-267
Cow position: chr15:18576813-18576640 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 68, 26

Conread position: 93-267
Cow position: chr15:35753497-35753672 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 68, 0

Conread position: 93-268
Cow position: chr15:4385367-4385193 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 68, 153

Conread position: 93-268
Cow position: chr15:7837344-7837169 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 68, 157

Conread position: 93-268
Cow position: chr15:15347020-15347194 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 146
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 65, 45

Conread position: 93-268
Cow position: chr15:21665646-21665821 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 68, 157

Conread position: 93-268
Cow position: chr15:31358986-31358811 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 68, 157

Conread position: 93-268
Cow position: chr15:42936808-42936639 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 54, 0

Conread position: 93-269
Cow position: chr15:7260729-7260550 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 65, 0

Conread position: 93-270
Cow position: chr15:12421065-12421244 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 93-270
Cow position: chr15:44828894-44828716 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 68, 0

Conread position: 93-274
Cow position: chr15:37392590-37392409 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 68, 132

Conread position: 93-275
Cow position: chr15:315760-315942 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 157

Conread position: 93-275
Cow position: chr15:4765305-4765122 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 68, 0

Conread position: 93-275
Cow position: chr15:6155849-6156036 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 70, 0

Conread position: 93-275
Cow position: chr15:8750522-8750343 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 144
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 61, 0

Conread position: 93-275
Cow position: chr15:10888711-10888522 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 113, 66

Conread position: 93-275
Cow position: chr15:32494287-32494469 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 68, 157

Conread position: 93-275
Cow position: chr15:51216688-51216506 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 148
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 68, 149

Conread position: 93-276
Cow position: chr15:524761-524945 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 68, 0

Conread position: 93-279
Cow position: chr15:41366269-41366083 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 65, 87

Conread position: 93-283
Cow position: chr15:44070022-44069834 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 110

Conread position: 93-285
Cow position: chr15:4922250-4922058 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 153
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 68, 157

Conread position: 93-293
Cow position: chr15:24295194-24294999 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 68, 136

Conread position: 93-298
Cow position: chr15:4961741-4961539 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 159
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 171, 60

Conread position: 93-315
Cow position: chr15:7965865-7966095 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 50, 137

Conread position: 93-335
Cow position: chr15:51715057-51714812 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 93-387
Cow position: chr15:16508093-16507789 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 188, 58

Conread position: 93-401
Cow position: chr15:1237782-1237474 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 141, 65

Conread position: 93-403
Cow position: chr15:36643033-36642724 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 61

Conread position: 93-414
Cow position: chr15:9430038-9429724 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 221
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 226, 28

Conread position: 96-266
Cow position: chr15:28490052-28490221 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 96-266
Cow position: chr15:50123851-50124022 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 96-267
Cow position: chr15:1764186-1764015 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 96-275
Cow position: chr15:18332732-18332911 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 144
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 62, 45

Conread position: 96-287
Cow position: chr15:9912730-9912543 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 65, 35

Conread position: 96-342
Cow position: chr15:35735668-35735420 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 38

Conread position: 98-221
Cow position: chr15:5980453-5980327 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 98-245
Cow position: chr15:3009763-3009910 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 40

Conread position: 98-250
Cow position: chr15:42320332-42320485 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 98-255
Cow position: chr15:2012169-2012013 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 63, 131

Conread position: 98-258
Cow position: chr15:1519061-1519222 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 98-258
Cow position: chr15:2647566-2647728 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 98-258
Cow position: chr15:4196551-4196391 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 143

Conread position: 98-265
Cow position: chr15:3888966-3888800 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 63, 114

Conread position: 98-266
Cow position: chr15:444696-444528 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 63, 144

Conread position: 98-266
Cow position: chr15:1834372-1834541 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 42, 153

Conread position: 98-266
Cow position: chr15:6471830-6471997 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 162, 0

Conread position: 98-266
Cow position: chr15:18267898-18268067 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 63, 0

Conread position: 98-266
Cow position: chr15:50147167-50146998 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 98-267
Cow position: chr15:4142729-4142900 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 63, 0

Conread position: 98-268
Cow position: chr15:1882417-1882588 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 63, 0

Conread position: 98-268
Cow position: chr15:36077336-36077165 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 63, 0

Conread position: 98-268
Cow position: chr15:36971010-36970842 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 63, 19

Conread position: 98-269
Cow position: chr15:1772587-1772416 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 63, 163

Conread position: 98-283
Cow position: chr15:29009928-29009744 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 63, 163

Conread position: 100-275
Cow position: chr15:7544974-7544799 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 129

Conread position: 101-269
Cow position: chr15:7234389-7234223 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 102-265
Cow position: chr15:17080117-17080281 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 102-401
Cow position: chr15:12615563-12615269 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 105

Conread position: 103-301
Cow position: chr15:32673462-32673658 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 55, 25

Conread position: 111-266
Cow position: chr15:4682312-4682157 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 98

Conread position: 115-386
Cow position: chr15:24716942-24716679 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 47

Conread position: 117-399
Cow position: chr15:36626219-36626480 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 44, 127

Conread position: 118-407
Cow position: chr15:21449774-21449486 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 40, 139

Conread position: 121-265
Cow position: chr15:6592872-6593017 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 121-274
Cow position: chr15:2924951-2924805 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 129-269
Cow position: chr15:6553794-6553933 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 136-387
Cow position: chr15:686968-686728 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 39

Conread position: 142-275
Cow position: chr15:36648961-36648825 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 143-266
Cow position: chr15:23156790-23156916 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 144-275
Cow position: chr15:25185914-25186045 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 85

Conread position: 148-266
Cow position: chr15:38195534-38195414 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 148-267
Cow position: chr15:17271352-17271471 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 108, 9

Conread position: 148-275
Cow position: chr15:10787082-10787211 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 208-399
Cow position: chr15:35647922-35648122 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 81, 173

Conread position: 208-403
Cow position: chr15:369369-369572 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 71, 49

Show alignments to all cow chromosomes.