Cow genome map
Conread name: | Lym2-sn47_F07.f |
Conread position: | 91-269 |
Cow position: | chr16:2238986-2239164 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 141 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 70, 47 |
Conread position: | 91-394 |
Cow position: | chr16:42739352-42739648 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 227 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 38, 48 |
Conread position: | 91-399 |
Cow position: | chr16:25257691-25257377 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 67, 224 |
Conread position: | 92-283 |
Cow position: | chr16:25341720-25341529 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 155 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 66, 138 |
Conread position: | 93-198 |
Cow position: | chr16:15492981-15492875 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 87 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 93-214 |
Cow position: | chr16:14666060-14666182 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 93-224 |
Cow position: | chr16:24105456-24105325 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 107 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 93-227 |
Cow position: | chr16:18498565-18498700 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 65, 120 |
Conread position: | 93-255 |
Cow position: | chr16:18687376-18687539 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 129 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 93-267 |
Cow position: | chr16:15566493-15566320 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 141 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 65, 114 |
Conread position: | 93-267 |
Cow position: | chr16:26663504-26663328 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 142 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 65, 159 |
Conread position: | 93-268 |
Cow position: | chr16:5484072-5483901 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 144 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 68, 150 |
Conread position: | 93-268 |
Cow position: | chr16:8816353-8816526 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 141 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 68, 157 |
Conread position: | 93-268 |
Cow position: | chr16:10437994-10437819 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 146 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 68, 157 |
Conread position: | 93-268 |
Cow position: | chr16:12538173-12538347 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 147 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 68, 157 |
Conread position: | 93-268 |
Cow position: | chr16:23983063-23982888 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 144 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 68, 148 |
Conread position: | 93-268 |
Cow position: | chr16:25457712-25457887 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 146 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 68, 157 |
Conread position: | 93-268 |
Cow position: | chr16:40296425-40296600 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 145 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 68, 157 |
Conread position: | 93-275 |
Cow position: | chr16:407279-407461 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 149 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 65, 157 |
Conread position: | 93-275 |
Cow position: | chr16:1567701-1567884 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 148 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 93-275 |
Cow position: | chr16:2483388-2483572 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 149 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 65, 90 |
Conread position: | 93-275 |
Cow position: | chr16:2727535-2727718 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 149 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 93-275 |
Cow position: | chr16:28471350-28471532 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 147 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 65, 79 |
Conread position: | 93-275 |
Cow position: | chr16:34530074-34529891 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 142 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 93-283 |
Cow position: | chr16:2411215-2411405 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 151 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 68, 157 |
Conread position: | 93-283 |
Cow position: | chr16:23252753-23252943 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 150 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 70, 158 |
Conread position: | 93-285 |
Cow position: | chr16:43897518-43897711 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 156 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 68, 157 |
Conread position: | 93-287 |
Cow position: | chr16:31592161-31592349 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 149 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 65, 127 |
Conread position: | 93-399 |
Cow position: | chr16:5890265-5889966 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 80 |
Conread position: | 93-399 |
Cow position: | chr16:23808174-23807872 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 95 |
Conread position: | 93-399 |
Cow position: | chr16:29033794-29033487 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 165, 65 |
Conread position: | 93-399 |
Cow position: | chr16:49235075-49235375 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 120 |
Conread position: | 94-419 |
Cow position: | chr16:47473322-47473011 (view UCSC Genome Browser custom track) |
Alignm length: | 330 |
Alignm identity: | 230 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 67, 129 |
Conread position: | 95-258 |
Cow position: | chr16:31832376-31832212 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 130 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 96-285 |
Cow position: | chr16:15184552-15184363 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 152 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 65, 33 |
Conread position: | 96-300 |
Cow position: | chr16:25085391-25085188 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 158 |
Alignm E-value: | 5.99994e-41 |
Alignm gaps (pig, cow): | 79, 179 |
Conread position: | 96-396 |
Cow position: | chr16:9930685-9930404 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 220 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 48, 155 |
Conread position: | 96-401 |
Cow position: | chr16:16271847-16272161 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 227 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 62, 167 |
Conread position: | 97-268 |
Cow position: | chr16:10203690-10203852 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 137 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 61, 101 |
Conread position: | 98-247 |
Cow position: | chr16:41163318-41163468 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 118 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 98-258 |
Cow position: | chr16:25188377-25188221 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 128 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 63, 131 |
Conread position: | 98-265 |
Cow position: | chr16:28170625-28170791 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 128 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 63, 75 |
Conread position: | 98-266 |
Cow position: | chr16:32480-32310 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 126 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 98-266 |
Cow position: | chr16:5661590-5661422 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 128 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 63, 40 |
Conread position: | 98-266 |
Cow position: | chr16:10375837-10376006 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 130 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 98-268 |
Cow position: | chr16:53046095-53045924 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 129 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 101-268 |
Cow position: | chr16:25441369-25441202 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 140 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 60, 149 |
Conread position: | 101-459 |
Cow position: | chr16:25156133-25156498 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 264 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 56 |
Conread position: | 102-245 |
Cow position: | chr16:4302595-4302738 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 111 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 118-266 |
Cow position: | chr16:1431885-1431736 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 117 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 118-364 |
Cow position: | chr16:18763893-18764136 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 189 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 43, 181 |
Conread position: | 127-266 |
Cow position: | chr16:50506908-50506767 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 110 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 134-268 |
Cow position: | chr16:27734080-27734214 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 109 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 27, 116 |
Conread position: | 141-265 |
Cow position: | chr16:36361660-36361782 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 101 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 17, 30 |
Conread position: | 141-266 |
Cow position: | chr16:14430299-14430172 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 100 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 141-275 |
Cow position: | chr16:20254605-20254741 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 103 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 147-315 |
Cow position: | chr16:29675677-29675848 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 123 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 11, 126 |
Conread position: | 194-399 |
Cow position: | chr16:49256472-49256682 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 162 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 113, 70 |
Conread position: | 230-421 |
Cow position: | chr16:18499094-18499289 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 144 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 31, 50 |
Show alignments to all cow chromosomes.