Cow genome map

Conread name: Lym2-sn47_F07.f

Conread position: 91-269
Cow position: chr16:2238986-2239164 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 70, 47

Conread position: 91-394
Cow position: chr16:42739352-42739648 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 38, 48

Conread position: 91-399
Cow position: chr16:25257691-25257377 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 224

Conread position: 92-283
Cow position: chr16:25341720-25341529 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 155
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 66, 138

Conread position: 93-198
Cow position: chr16:15492981-15492875 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 93-214
Cow position: chr16:14666060-14666182 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 93-224
Cow position: chr16:24105456-24105325 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 93-227
Cow position: chr16:18498565-18498700 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 120

Conread position: 93-255
Cow position: chr16:18687376-18687539 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 69, 0

Conread position: 93-267
Cow position: chr16:15566493-15566320 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 114

Conread position: 93-267
Cow position: chr16:26663504-26663328 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 142
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 65, 159

Conread position: 93-268
Cow position: chr16:5484072-5483901 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 68, 150

Conread position: 93-268
Cow position: chr16:8816353-8816526 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 68, 157

Conread position: 93-268
Cow position: chr16:10437994-10437819 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 146
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 68, 157

Conread position: 93-268
Cow position: chr16:12538173-12538347 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 147
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 68, 157

Conread position: 93-268
Cow position: chr16:23983063-23982888 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 68, 148

Conread position: 93-268
Cow position: chr16:25457712-25457887 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 146
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 68, 157

Conread position: 93-268
Cow position: chr16:40296425-40296600 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 145
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 68, 157

Conread position: 93-275
Cow position: chr16:407279-407461 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 149
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 65, 157

Conread position: 93-275
Cow position: chr16:1567701-1567884 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 148
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 68, 0

Conread position: 93-275
Cow position: chr16:2483388-2483572 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 149
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 65, 90

Conread position: 93-275
Cow position: chr16:2727535-2727718 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 149
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 68, 0

Conread position: 93-275
Cow position: chr16:28471350-28471532 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 147
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 65, 79

Conread position: 93-275
Cow position: chr16:34530074-34529891 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 68, 0

Conread position: 93-283
Cow position: chr16:2411215-2411405 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 68, 157

Conread position: 93-283
Cow position: chr16:23252753-23252943 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 70, 158

Conread position: 93-285
Cow position: chr16:43897518-43897711 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 156
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 68, 157

Conread position: 93-287
Cow position: chr16:31592161-31592349 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 65, 127

Conread position: 93-399
Cow position: chr16:5890265-5889966 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 80

Conread position: 93-399
Cow position: chr16:23808174-23807872 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 95

Conread position: 93-399
Cow position: chr16:29033794-29033487 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 65

Conread position: 93-399
Cow position: chr16:49235075-49235375 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 120

Conread position: 94-419
Cow position: chr16:47473322-47473011 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 67, 129

Conread position: 95-258
Cow position: chr16:31832376-31832212 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 66, 0

Conread position: 96-285
Cow position: chr16:15184552-15184363 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 152
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 65, 33

Conread position: 96-300
Cow position: chr16:25085391-25085188 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 79, 179

Conread position: 96-396
Cow position: chr16:9930685-9930404 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 220
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 48, 155

Conread position: 96-401
Cow position: chr16:16271847-16272161 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 227
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 62, 167

Conread position: 97-268
Cow position: chr16:10203690-10203852 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 101

Conread position: 98-247
Cow position: chr16:41163318-41163468 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 98-258
Cow position: chr16:25188377-25188221 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 63, 131

Conread position: 98-265
Cow position: chr16:28170625-28170791 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 63, 75

Conread position: 98-266
Cow position: chr16:32480-32310 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 98-266
Cow position: chr16:5661590-5661422 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 63, 40

Conread position: 98-266
Cow position: chr16:10375837-10376006 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 63, 0

Conread position: 98-268
Cow position: chr16:53046095-53045924 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 101-268
Cow position: chr16:25441369-25441202 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 140
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 60, 149

Conread position: 101-459
Cow position: chr16:25156133-25156498 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 56

Conread position: 102-245
Cow position: chr16:4302595-4302738 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 118-266
Cow position: chr16:1431885-1431736 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 43, 0

Conread position: 118-364
Cow position: chr16:18763893-18764136 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 43, 181

Conread position: 127-266
Cow position: chr16:50506908-50506767 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 134-268
Cow position: chr16:27734080-27734214 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 27, 116

Conread position: 141-265
Cow position: chr16:36361660-36361782 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 30

Conread position: 141-266
Cow position: chr16:14430299-14430172 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 141-275
Cow position: chr16:20254605-20254741 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 147-315
Cow position: chr16:29675677-29675848 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 126

Conread position: 194-399
Cow position: chr16:49256472-49256682 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 113, 70

Conread position: 230-421
Cow position: chr16:18499094-18499289 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 31, 50

Show alignments to all cow chromosomes.