Cow genome map


           Conread name:
           Lym2-sn47_F07.f
        

               Conread position:
               92-399
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 168
               

               Conread position:
               93-237
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-258
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               68, 19
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               144
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               41, 167
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               68, 159
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               33, 160
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               65, 137
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               146
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               147
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               70, 129
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               147
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               68, 165
               

               Conread position:
               93-283
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               153
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               68, 148
               

               Conread position:
               93-283
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               153
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               65, 149
               

               Conread position:
               93-285
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               34, 88
               

               Conread position:
               93-320
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               62, 41
               

               Conread position:
               93-327
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-350
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               238, 49
               

               Conread position:
               94-267
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               96-266
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-268
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               62, 111
               

               Conread position:
               96-283
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               65, 154
               

               Conread position:
               96-385
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               62, 133
               

               Conread position:
               98-230
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               63, 75
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               98-268
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               63, 25
               

               Conread position:
               102-265
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               116-258
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               135-275
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               141-266
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               141-275
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               142-265
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               142-275
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               147-254
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               229-397
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               87, 45
               
Show alignments to all cow chromosomes.