Cow genome map
| Conread name: | Lym2-sn47_F07.f |
| Conread position: | 92-399 |
| Cow position: | chr18:54170998-54171310 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 168 |
| Conread position: | 93-237 |
| Cow position: | chr18:16088684-16088539 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-258 |
| Cow position: | chr18:51481372-51481208 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 68, 19 |
| Conread position: | 93-267 |
| Cow position: | chr18:27837778-27837952 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 144 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-267 |
| Cow position: | chr18:28973354-28973538 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 41, 167 |
| Conread position: | 93-268 |
| Cow position: | chr18:14416516-14416339 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 68, 159 |
| Conread position: | 93-268 |
| Cow position: | chr18:16176078-16176254 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 33, 160 |
| Conread position: | 93-268 |
| Cow position: | chr18:25351287-25351112 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 65, 137 |
| Conread position: | 93-268 |
| Cow position: | chr18:36508871-36508696 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 146 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-268 |
| Cow position: | chr18:41840286-41840461 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 143 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 65, 157 |
| Conread position: | 93-275 |
| Cow position: | chr18:37505599-37505419 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 146 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 93-275 |
| Cow position: | chr18:52651456-52651275 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 147 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 70, 129 |
| Conread position: | 93-275 |
| Cow position: | chr18:54023587-54023769 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 147 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 68, 165 |
| Conread position: | 93-283 |
| Cow position: | chr18:14130929-14130739 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 153 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 68, 148 |
| Conread position: | 93-283 |
| Cow position: | chr18:40478921-40478732 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 153 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 65, 149 |
| Conread position: | 93-285 |
| Cow position: | chr18:32652739-32652548 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 34, 88 |
| Conread position: | 93-320 |
| Cow position: | chr18:33750550-33750325 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 62, 41 |
| Conread position: | 93-327 |
| Cow position: | chr18:29765511-29765264 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 93-350 |
| Cow position: | chr18:54004048-54003809 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 238, 49 |
| Conread position: | 94-267 |
| Cow position: | chr18:33336402-33336226 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 146 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 96-266 |
| Cow position: | chr18:11274577-11274748 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 96-268 |
| Cow position: | chr18:23798181-23798011 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 62, 111 |
| Conread position: | 96-283 |
| Cow position: | chr18:27987599-27987413 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 65, 154 |
| Conread position: | 96-385 |
| Cow position: | chr18:8169237-8168942 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 217 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 62, 133 |
| Conread position: | 98-230 |
| Cow position: | chr18:51660874-51660741 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-258 |
| Cow position: | chr18:24040198-24040366 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 98-266 |
| Cow position: | chr18:51342213-51342044 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-266 |
| Cow position: | chr18:51462553-51462721 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 63, 75 |
| Conread position: | 98-266 |
| Cow position: | chr18:55088394-55088566 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 98-268 |
| Cow position: | chr18:22603014-22602843 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-268 |
| Cow position: | chr18:33953049-33953219 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 63, 25 |
| Conread position: | 102-265 |
| Cow position: | chr18:33269353-33269191 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 116-258 |
| Cow position: | chr18:19352886-19352748 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 135-275 |
| Cow position: | chr18:24700616-24700757 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 141-266 |
| Cow position: | chr18:16534469-16534343 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 141-275 |
| Cow position: | chr18:43146439-43146570 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 142-265 |
| Cow position: | chr18:47719093-47719218 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 142-275 |
| Cow position: | chr18:17991931-17992065 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 16, 25 |
| Conread position: | 147-254 |
| Cow position: | chr18:2019199-2019307 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 88 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 229-397 |
| Cow position: | chr18:51275531-51275702 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 87, 45 |
Show alignments to all cow chromosomes.