Cow genome map
| Conread name: | Lym2-sn47_F07.f |
| Conread position: | 92-268 |
| Cow position: | chr19:33942145-33941978 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 66, 90 |
| Conread position: | 92-394 |
| Cow position: | chr19:32182537-32182846 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 93-234 |
| Cow position: | chr19:4386158-4386012 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 93-266 |
| Cow position: | chr19:40817166-40817334 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 65, 17 |
| Conread position: | 93-267 |
| Cow position: | chr19:204499-204324 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-267 |
| Cow position: | chr19:5729372-5729198 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-268 |
| Cow position: | chr19:28581118-28581293 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 145 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-268 |
| Cow position: | chr19:39185003-39185178 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 143 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-269 |
| Cow position: | chr19:2273843-2274020 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-270 |
| Cow position: | chr19:341762-341585 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 70, 160 |
| Conread position: | 93-283 |
| Cow position: | chr19:172749-172564 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 93-292 |
| Cow position: | chr19:75712-75904 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 65, 28 |
| Conread position: | 93-293 |
| Cow position: | chr19:893065-893265 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 197 |
| Conread position: | 93-299 |
| Cow position: | chr19:438899-439103 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 65, 45 |
| Conread position: | 93-373 |
| Cow position: | chr19:33873969-33873700 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 205 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-397 |
| Cow position: | chr19:39668966-39669277 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 272 |
| Conread position: | 93-403 |
| Cow position: | chr19:377034-377356 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 65, 34 |
| Conread position: | 93-423 |
| Cow position: | chr19:27051973-27052298 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 110 |
| Conread position: | 93-459 |
| Cow position: | chr19:3138480-3138110 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 150 |
| Conread position: | 94-399 |
| Cow position: | chr19:136472-136795 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 64, 32 |
| Conread position: | 95-258 |
| Cow position: | chr19:43144247-43144086 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 96-255 |
| Cow position: | chr19:38428-38268 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 96-258 |
| Cow position: | chr19:32211540-32211703 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 96-267 |
| Cow position: | chr19:40851898-40852070 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 97-275 |
| Cow position: | chr19:7488850-7488673 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 61, 77 |
| Conread position: | 98-258 |
| Cow position: | chr19:7342598-7342441 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 63, 103 |
| Conread position: | 98-266 |
| Cow position: | chr19:28593795-28593626 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-268 |
| Cow position: | chr19:5208703-5208532 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 99-403 |
| Cow position: | chr19:352113-352422 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 34, 117 |
| Conread position: | 100-213 |
| Cow position: | chr19:168071-168185 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 101-266 |
| Cow position: | chr19:773124-772959 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 60, 149 |
| Conread position: | 101-266 |
| Cow position: | chr19:52151302-52151468 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 101-268 |
| Cow position: | chr19:39391043-39390876 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 60, 149 |
| Conread position: | 102-265 |
| Cow position: | chr19:20105238-20105067 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 132-266 |
| Cow position: | chr19:417165-417029 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 135-397 |
| Cow position: | chr19:162600-162865 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 155, 224 |
| Conread position: | 138-351 |
| Cow position: | chr19:263645-263429 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 141-284 |
| Cow position: | chr19:28376984-28376839 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 148-374 |
| Cow position: | chr19:35377649-35377413 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 97, 102 |
| Conread position: | 149-275 |
| Cow position: | chr19:32666010-32665882 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 168-426 |
| Cow position: | chr19:32222552-32222819 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 213 |
| Conread position: | 177-399 |
| Cow position: | chr19:39689481-39689253 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 64, 161 |
| Conread position: | 179-399 |
| Cow position: | chr19:43471-43246 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 103, 198 |
Show alignments to all cow chromosomes.