Cow genome map

Conread name: Lym2-sn47_F07.f

Conread position: 92-376
Cow position: chr2:45967964-45968247 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 138

Conread position: 93-200
Cow position: chr2:6961443-6961335 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 93-218
Cow position: chr2:31297775-31297651 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 93-220
Cow position: chr2:16290320-16290192 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 93-231
Cow position: chr2:781455-781594 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 93-240
Cow position: chr2:19011325-19011177 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 123
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 68, 0

Conread position: 93-244
Cow position: chr2:47603267-47603419 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 93-266
Cow position: chr2:5870374-5870547 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 65, 107

Conread position: 93-266
Cow position: chr2:41172649-41172480 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 65, 97

Conread position: 93-267
Cow position: chr2:10732786-10732957 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 68, 155

Conread position: 93-267
Cow position: chr2:50983245-50983418 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 65, 33

Conread position: 93-268
Cow position: chr2:282708-282882 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 141
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 68, 134

Conread position: 93-268
Cow position: chr2:8118521-8118346 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 146
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 68, 157

Conread position: 93-268
Cow position: chr2:12224329-12224504 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 65, 157

Conread position: 93-268
Cow position: chr2:36980359-36980185 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 65, 88

Conread position: 93-269
Cow position: chr2:22077762-22077584 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 154

Conread position: 93-275
Cow position: chr2:24146843-24146661 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 147
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 68, 45

Conread position: 93-275
Cow position: chr2:44991312-44991494 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 65, 157

Conread position: 93-275
Cow position: chr2:65938467-65938648 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 147
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 65, 108

Conread position: 93-275
Cow position: chr2:81256791-81256607 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 49, 159

Conread position: 93-276
Cow position: chr2:13045721-13045905 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 155
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 157

Conread position: 93-276
Cow position: chr2:69584642-69584828 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 68, 45

Conread position: 93-277
Cow position: chr2:175547-175733 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 93-283
Cow position: chr2:16900234-16900045 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 153
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 69, 158

Conread position: 93-283
Cow position: chr2:28793237-28793047 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 157
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 157

Conread position: 93-284
Cow position: chr2:52062650-52062462 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 152
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 68, 28

Conread position: 93-285
Cow position: chr2:11159142-11159335 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 157
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 68, 157

Conread position: 93-293
Cow position: chr2:53329739-53329538 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 68, 158

Conread position: 93-304
Cow position: chr2:51998984-51999202 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 65, 97

Conread position: 93-344
Cow position: chr2:36053016-36053259 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 65, 28

Conread position: 93-399
Cow position: chr2:1363144-1362834 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 48

Conread position: 93-399
Cow position: chr2:34564617-34564934 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 290

Conread position: 93-399
Cow position: chr2:36030362-36030666 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 65, 32

Conread position: 93-399
Cow position: chr2:39622606-39622300 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 219

Conread position: 93-405
Cow position: chr2:7902999-7902691 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 124

Conread position: 95-259
Cow position: chr2:5904881-5905048 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 63, 0

Conread position: 95-266
Cow position: chr2:2381083-2380911 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 66, 43

Conread position: 95-336
Cow position: chr2:198809-199048 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 66, 134

Conread position: 95-386
Cow position: chr2:29030127-29029836 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 206
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 142

Conread position: 96-266
Cow position: chr2:9907888-9907717 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 65, 0

Conread position: 96-386
Cow position: chr2:28748130-28747841 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 60, 38

Conread position: 97-210
Cow position: chr2:42671012-42671126 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 97-241
Cow position: chr2:80292973-80293118 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 97-266
Cow position: chr2:10186254-10186421 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 137
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 61, 0

Conread position: 97-283
Cow position: chr2:50077578-50077392 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 64, 24

Conread position: 98-245
Cow position: chr2:59413708-59413855 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 43

Conread position: 98-258
Cow position: chr2:51990276-51990436 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 128
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 63, 40

Conread position: 98-266
Cow position: chr2:212249-212417 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 60, 143

Conread position: 98-266
Cow position: chr2:2088200-2088369 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 98-266
Cow position: chr2:4403184-4403353 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 98-266
Cow position: chr2:10611658-10611822 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 12

Conread position: 98-266
Cow position: chr2:25030507-25030672 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 18

Conread position: 98-266
Cow position: chr2:44091274-44091105 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 98-266
Cow position: chr2:47038441-47038610 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 98-266
Cow position: chr2:57335169-57335000 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 98-266
Cow position: chr2:67419327-67419495 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 63, 129

Conread position: 98-267
Cow position: chr2:3324587-3324762 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 0

Conread position: 98-267
Cow position: chr2:49472220-49472049 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 63, 0

Conread position: 98-267
Cow position: chr2:80955663-80955834 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 134
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 63, 0

Conread position: 98-268
Cow position: chr2:5474489-5474318 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 98-268
Cow position: chr2:49590374-49590203 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 98-269
Cow position: chr2:2184283-2184454 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 63, 162

Conread position: 98-270
Cow position: chr2:26921658-26921486 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 63, 160

Conread position: 98-275
Cow position: chr2:28650254-28650429 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 143
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 60, 0

Conread position: 98-277
Cow position: chr2:54737479-54737298 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 98-279
Cow position: chr2:2412823-2413003 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 64, 163

Conread position: 98-351
Cow position: chr2:41686486-41686231 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 63, 85

Conread position: 101-266
Cow position: chr2:52616440-52616274 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 101-266
Cow position: chr2:57588666-57588500 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 60, 0

Conread position: 101-275
Cow position: chr2:4926199-4926374 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 58, 0

Conread position: 101-395
Cow position: chr2:5963105-5963411 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 283

Conread position: 102-266
Cow position: chr2:39421548-39421383 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 102-271
Cow position: chr2:78762432-78762264 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 157, 56

Conread position: 102-387
Cow position: chr2:11729837-11729561 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 36

Conread position: 103-433
Cow position: chr2:49604908-49604591 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 230
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 55, 97

Conread position: 104-292
Cow position: chr2:32655325-32655143 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 18, 137

Conread position: 107-269
Cow position: chr2:24922362-24922197 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 68

Conread position: 110-268
Cow position: chr2:57141725-57141884 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 111-238
Cow position: chr2:16075777-16075903 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 30

Conread position: 111-258
Cow position: chr2:51990571-51990718 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 27

Conread position: 111-314
Cow position: chr2:3789863-3790068 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 49

Conread position: 114-396
Cow position: chr2:78742273-78741978 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 206
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 44, 273

Conread position: 121-387
Cow position: chr2:72681663-72681928 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 133

Conread position: 123-255
Cow position: chr2:572991-572858 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 136-268
Cow position: chr2:80517001-80516868 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 141-266
Cow position: chr2:2364122-2363995 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 141-275
Cow position: chr2:423005-422870 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 7

Conread position: 141-275
Cow position: chr2:44346649-44346517 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 17, 101

Conread position: 148-287
Cow position: chr2:26869198-26869057 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 10, 0

Show alignments to all cow chromosomes.