Cow genome map


           Conread name:
           Lym2-sn47_F07.f
        

               Conread position:
               64-378
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               94, 25
               

               Conread position:
               91-386
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               49, 23
               

               Conread position:
               93-253
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-256
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-266
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               143
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-266
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-266
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               144
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               74, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               68, 149
               

               Conread position:
               93-270
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               65, 105
               

               Conread position:
               93-274
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               66, 45
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               150
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               65, 153
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 37
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               93-277
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               93-279
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-283
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 148
               

               Conread position:
               93-297
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               44, 76
               

               Conread position:
               93-300
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               93-387
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               221
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               93-399
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 178
               

               Conread position:
               93-399
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 189
               

               Conread position:
               93-399
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 240
               

               Conread position:
               93-399
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 287
               

               Conread position:
               93-403
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 65
               

               Conread position:
               93-403
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 18
               

               Conread position:
               98-245
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 28
               

               Conread position:
               98-256
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               98-258
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               98-265
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               63, 103
               

               Conread position:
               98-268
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               62, 75
               

               Conread position:
               101-250
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               101-266
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-266
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               102-266
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               59, 24
               

               Conread position:
               102-266
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               102-267
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               59, 23
               

               Conread position:
               103-414
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 192
               

               Conread position:
               108-270
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               109-263
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               138-399
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               180, 20
               

               Conread position:
               141-265
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               141-275
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               142-275
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               142-275
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               109, 20
               

               Conread position:
               142-383
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               63, 19
               

               Conread position:
               161-275
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               162-275
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               164-397
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               128, 62
               

               Conread position:
               191-397
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               81, 54
               
Show alignments to all cow chromosomes.