Cow genome map
| Conread name: | Lym2-sn47_F07.f |
| Conread position: | 64-378 |
| Cow position: | chr22:8876071-8875768 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 25 |
| Conread position: | 91-386 |
| Cow position: | chr22:11032196-11031902 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 49, 23 |
| Conread position: | 93-253 |
| Cow position: | chr22:12731230-12731391 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-256 |
| Cow position: | chr22:8739774-8739942 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-266 |
| Cow position: | chr22:31313785-31313612 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 143 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-266 |
| Cow position: | chr22:31334592-31334765 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 65, 157 |
| Conread position: | 93-266 |
| Cow position: | chr22:44490324-44490150 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 93-268 |
| Cow position: | chr22:560259-560434 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 144 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-268 |
| Cow position: | chr22:17328294-17328468 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 144 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-268 |
| Cow position: | chr22:18815940-18816115 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-268 |
| Cow position: | chr22:19143246-19143428 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-268 |
| Cow position: | chr22:34168776-34168602 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 146 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 68, 136 |
| Conread position: | 93-268 |
| Cow position: | chr22:36861088-36861259 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 68, 136 |
| Conread position: | 93-268 |
| Cow position: | chr22:42991617-42991443 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 74, 157 |
| Conread position: | 93-268 |
| Cow position: | chr22:44396888-44396713 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-268 |
| Cow position: | chr22:44934422-44934250 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 68, 149 |
| Conread position: | 93-270 |
| Cow position: | chr22:15313510-15313682 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 65, 105 |
| Conread position: | 93-274 |
| Cow position: | chr22:326728-326907 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 66, 45 |
| Conread position: | 93-275 |
| Cow position: | chr22:525249-525430 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 150 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 65, 153 |
| Conread position: | 93-275 |
| Cow position: | chr22:13773338-13773157 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 93-275 |
| Cow position: | chr22:36184195-36184019 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 93-275 |
| Cow position: | chr22:46630603-46630787 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 93-277 |
| Cow position: | chr22:15851760-15851575 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 93-279 |
| Cow position: | chr22:5308546-5308358 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-283 |
| Cow position: | chr22:39469077-39469266 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 68, 148 |
| Conread position: | 93-297 |
| Cow position: | chr22:34599849-34599645 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 44, 76 |
| Conread position: | 93-300 |
| Cow position: | chr22:44352536-44352735 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 93-387 |
| Cow position: | chr22:37132865-37132577 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 221 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 65, 45 |
| Conread position: | 93-399 |
| Cow position: | chr22:1322568-1322264 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 178 |
| Conread position: | 93-399 |
| Cow position: | chr22:3305956-3306265 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 189 |
| Conread position: | 93-399 |
| Cow position: | chr22:13918274-13917971 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 240 |
| Conread position: | 93-399 |
| Cow position: | chr22:35906949-35907260 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 287 |
| Conread position: | 93-403 |
| Cow position: | chr22:6502691-6503016 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 65 |
| Conread position: | 93-403 |
| Cow position: | chr22:23854100-23853793 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 18 |
| Conread position: | 98-245 |
| Cow position: | chr22:6021097-6020949 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-245 |
| Cow position: | chr22:20240410-20240556 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 98-256 |
| Cow position: | chr22:5232848-5233007 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-258 |
| Cow position: | chr22:3277922-3278083 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-258 |
| Cow position: | chr22:10909401-10909560 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 98-258 |
| Cow position: | chr22:27284465-27284304 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 40 |
| Conread position: | 98-265 |
| Cow position: | chr22:46581154-46581322 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-266 |
| Cow position: | chr22:1879226-1879058 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 98-266 |
| Cow position: | chr22:18027713-18027544 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-266 |
| Cow position: | chr22:27309343-27309508 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 63, 103 |
| Conread position: | 98-268 |
| Cow position: | chr22:16814320-16814149 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-269 |
| Cow position: | chr22:44369192-44369363 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 62, 75 |
| Conread position: | 101-250 |
| Cow position: | chr22:5932393-5932549 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 101-266 |
| Cow position: | chr22:694054-693888 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 101-266 |
| Cow position: | chr22:35671925-35672091 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 102-266 |
| Cow position: | chr22:537529-537366 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 59, 24 |
| Conread position: | 102-266 |
| Cow position: | chr22:24950526-24950361 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 102-267 |
| Cow position: | chr22:48004969-48004804 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 103-414 |
| Cow position: | chr22:1269358-1269670 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 192 |
| Conread position: | 108-270 |
| Cow position: | chr22:1522441-1522278 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 109-263 |
| Cow position: | chr22:1520585-1520740 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 138-399 |
| Cow position: | chr22:44610296-44610044 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 180, 20 |
| Conread position: | 141-265 |
| Cow position: | chr22:117444-117570 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 141-275 |
| Cow position: | chr22:36533342-36533478 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 142-275 |
| Cow position: | chr22:1861136-1861002 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 142-275 |
| Cow position: | chr22:42771850-42771718 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 109, 20 |
| Conread position: | 142-383 |
| Cow position: | chr22:46522130-46522381 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 63, 19 |
| Conread position: | 161-275 |
| Cow position: | chr22:46547285-46547401 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 162-275 |
| Cow position: | chr22:46853718-46853605 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 164-397 |
| Cow position: | chr22:1282947-1283188 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 128, 62 |
| Conread position: | 191-397 |
| Cow position: | chr22:41419031-41419234 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 81, 54 |
Show alignments to all cow chromosomes.