Cow genome map
| Conread name: | Lym2-sn47_F07.f |
| Conread position: | 93-209 |
| Cow position: | chr23:2794791-2794907 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 82 |
| Conread position: | 93-214 |
| Cow position: | chr23:1024580-1024700 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 93-215 |
| Cow position: | chr23:4817461-4817338 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 93-267 |
| Cow position: | chr23:966896-967078 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 62, 165 |
| Conread position: | 93-267 |
| Cow position: | chr23:15177516-15177342 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 65, 105 |
| Conread position: | 93-267 |
| Cow position: | chr23:19489987-19489814 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-267 |
| Cow position: | chr23:28913838-28913665 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 141 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 93-267 |
| Cow position: | chr23:36030932-36031105 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 145 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 141, 65 |
| Conread position: | 93-268 |
| Cow position: | chr23:2758040-2757865 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-268 |
| Cow position: | chr23:4640184-4640353 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 144 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 93-268 |
| Cow position: | chr23:14965306-14965481 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 145 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 65, 157 |
| Conread position: | 93-268 |
| Cow position: | chr23:15526057-15525881 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 50, 77 |
| Conread position: | 93-269 |
| Cow position: | chr23:4434898-4434721 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 93-269 |
| Cow position: | chr23:14974112-14974295 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 93-270 |
| Cow position: | chr23:16616400-16616579 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-271 |
| Cow position: | chr23:2716834-2716658 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 65, 119 |
| Conread position: | 93-275 |
| Cow position: | chr23:2026673-2026856 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-275 |
| Cow position: | chr23:2781768-2781951 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-275 |
| Cow position: | chr23:4510521-4510340 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 66, 26 |
| Conread position: | 93-275 |
| Cow position: | chr23:22146808-22146991 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-275 |
| Cow position: | chr23:29451877-29452055 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 62, 43 |
| Conread position: | 93-275 |
| Cow position: | chr23:31594805-31594985 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 65, 113 |
| Conread position: | 93-276 |
| Cow position: | chr23:27399945-27399765 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 65, 114 |
| Conread position: | 93-279 |
| Cow position: | chr23:15219458-15219637 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 93-285 |
| Cow position: | chr23:4889118-4888926 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 65, 157 |
| Conread position: | 93-287 |
| Cow position: | chr23:3014839-3014642 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 93-293 |
| Cow position: | chr23:5874201-5874392 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 65, 105 |
| Conread position: | 93-294 |
| Cow position: | chr23:25683594-25683797 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 161 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 93-368 |
| Cow position: | chr23:9546025-9545743 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 206 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 65, 101 |
| Conread position: | 93-369 |
| Cow position: | chr23:15877324-15877599 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 65, 49 |
| Conread position: | 93-382 |
| Cow position: | chr23:2341533-2341240 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 65, 85 |
| Conread position: | 93-395 |
| Cow position: | chr23:16614993-16615297 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 220 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 65, 85 |
| Conread position: | 93-422 |
| Cow position: | chr23:1402051-1402379 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 50, 32 |
| Conread position: | 96-268 |
| Cow position: | chr23:11778931-11778759 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 141 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 65, 154 |
| Conread position: | 96-315 |
| Cow position: | chr23:20155773-20155991 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 65, 154 |
| Conread position: | 98-245 |
| Cow position: | chr23:19950153-19950300 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 63, 118 |
| Conread position: | 98-253 |
| Cow position: | chr23:4360263-4360106 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-255 |
| Cow position: | chr23:20302645-20302487 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 98-258 |
| Cow position: | chr23:28217724-28217563 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-267 |
| Cow position: | chr23:23830394-23830229 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 162, 60 |
| Conread position: | 98-268 |
| Cow position: | chr23:17785888-17786059 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-268 |
| Cow position: | chr23:31447249-31447078 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 101-275 |
| Cow position: | chr23:2574972-2574798 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 60, 152 |
| Conread position: | 125-268 |
| Cow position: | chr23:30635888-30636030 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 127-397 |
| Cow position: | chr23:22874916-22875169 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 196 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 31, 62 |
| Conread position: | 129-387 |
| Cow position: | chr23:7046249-7046512 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 33, 194 |
| Conread position: | 157-275 |
| Cow position: | chr23:988265-988385 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 160-275 |
| Cow position: | chr23:12887533-12887650 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
Show alignments to all cow chromosomes.