Cow genome map
| Conread name: | Lym2-sn47_F07.f |
| Conread position: | 90-460 |
| Cow position: | chr24:13302005-13302398 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 154 |
| Conread position: | 93-217 |
| Cow position: | chr24:6659970-6660095 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-224 |
| Cow position: | chr24:12796683-12796815 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 93-245 |
| Cow position: | chr24:30900606-30900750 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 93-254 |
| Cow position: | chr24:14390029-14390190 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 93-267 |
| Cow position: | chr24:148083-148261 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 38, 161 |
| Conread position: | 93-267 |
| Cow position: | chr24:12086731-12086556 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-268 |
| Cow position: | chr24:12335244-12335418 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 68, 149 |
| Conread position: | 93-268 |
| Cow position: | chr24:17696446-17696621 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-268 |
| Cow position: | chr24:22971618-22971447 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 62, 105 |
| Conread position: | 93-268 |
| Cow position: | chr24:29187815-29187640 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 143 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-274 |
| Cow position: | chr24:4414998-4415180 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 148 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 68, 158 |
| Conread position: | 93-275 |
| Cow position: | chr24:12130444-12130625 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 149 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 65, 97 |
| Conread position: | 93-275 |
| Cow position: | chr24:33933898-33933715 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-334 |
| Cow position: | chr24:12237768-12237519 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 49, 160 |
| Conread position: | 93-367 |
| Cow position: | chr24:19833917-19833654 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 149 |
| Conread position: | 93-381 |
| Cow position: | chr24:6669619-6669914 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 62, 26 |
| Conread position: | 93-394 |
| Cow position: | chr24:38638073-38637762 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 65, 160 |
| Conread position: | 93-399 |
| Cow position: | chr24:6336382-6336065 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 134 |
| Conread position: | 93-403 |
| Cow position: | chr24:36559230-36559551 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 153 |
| Conread position: | 93-459 |
| Cow position: | chr24:14333995-14333638 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 66 |
| Conread position: | 96-246 |
| Cow position: | chr24:6024583-6024732 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 74 |
| Conread position: | 98-225 |
| Cow position: | chr24:6084591-6084463 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-238 |
| Cow position: | chr24:7061914-7061772 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-241 |
| Cow position: | chr24:16084135-16084279 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-245 |
| Cow position: | chr24:9188211-9188360 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-258 |
| Cow position: | chr24:5992707-5992870 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 98-258 |
| Cow position: | chr24:6434759-6434597 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 98-258 |
| Cow position: | chr24:6646220-6646059 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-265 |
| Cow position: | chr24:33738819-33738988 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 98-266 |
| Cow position: | chr24:22793696-22793523 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-266 |
| Cow position: | chr24:29305803-29305974 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-266 |
| Cow position: | chr24:43814283-43814115 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 98-267 |
| Cow position: | chr24:40549385-40549223 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 34 |
| Conread position: | 98-267 |
| Cow position: | chr24:44018053-44017883 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 101-245 |
| Cow position: | chr24:8030669-8030523 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 101-258 |
| Cow position: | chr24:13188690-13188532 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 101-292 |
| Cow position: | chr24:37217531-37217347 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 102-268 |
| Cow position: | chr24:12484802-12484968 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 59, 127 |
| Conread position: | 102-401 |
| Cow position: | chr24:16648464-16648770 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 32, 81 |
| Conread position: | 102-405 |
| Cow position: | chr24:17313028-17313325 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 59, 19 |
| Conread position: | 103-399 |
| Cow position: | chr24:36708786-36708472 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 66, 287 |
| Conread position: | 104-386 |
| Cow position: | chr24:16472415-16472125 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 32, 148 |
| Conread position: | 105-275 |
| Cow position: | chr24:9091765-9091936 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 83 |
| Conread position: | 109-381 |
| Cow position: | chr24:32332536-32332258 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 49, 142 |
| Conread position: | 110-395 |
| Cow position: | chr24:12205797-12206083 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 167, 48 |
| Conread position: | 114-238 |
| Cow position: | chr24:1449764-1449638 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 118-292 |
| Cow position: | chr24:12232468-12232644 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 144 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 127-275 |
| Cow position: | chr24:12162351-12162204 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 34, 82 |
| Conread position: | 148-275 |
| Cow position: | chr24:35838144-35838273 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
Show alignments to all cow chromosomes.