Cow genome map
| Conread name: | Lym2-sn47_F07.f |
| Conread position: | 91-395 |
| Cow position: | chr28:10617339-10617638 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 96 |
| Conread position: | 92-381 |
| Cow position: | chr28:10229729-10230021 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 206 |
| Conread position: | 93-220 |
| Cow position: | chr28:8720808-8720937 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 93-266 |
| Cow position: | chr28:5937969-5937793 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 28, 18 |
| Conread position: | 93-267 |
| Cow position: | chr28:14705181-14705355 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 144 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 70, 157 |
| Conread position: | 93-267 |
| Cow position: | chr28:22260661-22260835 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 148 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 149 |
| Conread position: | 93-268 |
| Cow position: | chr28:1167392-1167566 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 149 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 149 |
| Conread position: | 93-268 |
| Cow position: | chr28:2084082-2083909 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 146 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 93-268 |
| Cow position: | chr28:5566639-5566460 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 32, 161 |
| Conread position: | 93-268 |
| Cow position: | chr28:5751215-5751390 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-268 |
| Cow position: | chr28:10581495-10581669 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 145 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 68, 149 |
| Conread position: | 93-268 |
| Cow position: | chr28:12409738-12409913 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 143 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-268 |
| Cow position: | chr28:13460459-13460285 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 147 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 68, 136 |
| Conread position: | 93-268 |
| Cow position: | chr28:17666809-17666982 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 144 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 68, 29 |
| Conread position: | 93-268 |
| Cow position: | chr28:26425761-26425936 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-268 |
| Cow position: | chr28:29820224-29820049 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 143 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-268 |
| Cow position: | chr28:32791886-32792065 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 38, 161 |
| Conread position: | 93-268 |
| Cow position: | chr28:34594468-34594294 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 143 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 93-269 |
| Cow position: | chr28:17388972-17388797 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 68, 29 |
| Conread position: | 93-270 |
| Cow position: | chr28:1386915-1387091 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 68, 45 |
| Conread position: | 93-275 |
| Cow position: | chr28:7002479-7002297 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 151 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 68, 45 |
| Conread position: | 93-275 |
| Cow position: | chr28:18519958-18520152 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 68, 14 |
| Conread position: | 93-283 |
| Cow position: | chr28:1505355-1505165 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 153 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 68, 157 |
| Conread position: | 93-335 |
| Cow position: | chr28:3020260-3020495 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 178 |
| Conread position: | 93-344 |
| Cow position: | chr28:10071772-10071521 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 65 |
| Conread position: | 93-403 |
| Cow position: | chr28:10497527-10497840 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 49 |
| Conread position: | 93-409 |
| Cow position: | chr28:5813499-5813180 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 210 |
| Conread position: | 93-454 |
| Cow position: | chr28:7789463-7789823 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 65 |
| Conread position: | 95-266 |
| Cow position: | chr28:485081-485253 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 96-266 |
| Cow position: | chr28:7822738-7822567 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 96-268 |
| Cow position: | chr28:782880-782710 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 65, 133 |
| Conread position: | 96-268 |
| Cow position: | chr28:5113811-5113983 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 142 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 60, 154 |
| Conread position: | 96-275 |
| Cow position: | chr28:12150790-12150611 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 65, 154 |
| Conread position: | 96-283 |
| Cow position: | chr28:1814382-1814566 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 152 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 62, 41 |
| Conread position: | 96-283 |
| Cow position: | chr28:7740966-7740782 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 62, 140 |
| Conread position: | 96-388 |
| Cow position: | chr28:2988756-2989048 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 62 |
| Conread position: | 96-399 |
| Cow position: | chr28:5798231-5797939 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 227 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 16, 41 |
| Conread position: | 98-218 |
| Cow position: | chr28:24588570-24588447 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 98-218 |
| Cow position: | chr28:24589332-24589209 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 98-243 |
| Cow position: | chr28:2724444-2724590 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-245 |
| Cow position: | chr28:6538783-6538931 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-258 |
| Cow position: | chr28:14751024-14750864 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 63, 76 |
| Conread position: | 98-266 |
| Cow position: | chr28:1953608-1953439 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 98-266 |
| Cow position: | chr28:6779858-6780024 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 63, 131 |
| Conread position: | 98-266 |
| Cow position: | chr28:22232921-22233090 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 106-246 |
| Cow position: | chr28:24668085-24667946 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 111-397 |
| Cow position: | chr28:21359810-21359515 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 165 |
| Conread position: | 121-268 |
| Cow position: | chr28:33252774-33252627 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 40, 129 |
| Conread position: | 123-268 |
| Cow position: | chr28:30805234-30805380 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 126-231 |
| Cow position: | chr28:3191791-3191895 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 138-355 |
| Cow position: | chr28:2886754-2886542 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 202, 23 |
| Conread position: | 141-275 |
| Cow position: | chr28:9954571-9954440 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 115, 17 |
| Conread position: | 142-275 |
| Cow position: | chr28:7901804-7901669 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 153-397 |
| Cow position: | chr28:29092137-29092390 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 93, 97 |
| Conread position: | 161-266 |
| Cow position: | chr28:9136629-9136735 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 86 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 177-369 |
| Cow position: | chr28:8720946-8721143 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 115, 42 |
| Conread position: | 192-369 |
| Cow position: | chr28:14947026-14946847 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 78, 88 |
| Conread position: | 231-405 |
| Cow position: | chr28:7817817-7817649 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 91, 58 |
Show alignments to all cow chromosomes.