Cow genome map
Conread name: | Lym2-sn47_F07.f |
Conread position: | 91-327 |
Cow position: | chr29:5982260-5982485 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 178 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 67, 116 |
Conread position: | 92-275 |
Cow position: | chr29:26164366-26164549 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 148 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 69, 158 |
Conread position: | 93-266 |
Cow position: | chr29:38227435-38227263 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 143 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 68, 136 |
Conread position: | 93-267 |
Cow position: | chr29:9643304-9643477 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 141 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 141, 65 |
Conread position: | 93-268 |
Cow position: | chr29:48017-48199 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 148 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 68, 164 |
Conread position: | 93-268 |
Cow position: | chr29:2100301-2100126 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 144 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 65, 157 |
Conread position: | 93-268 |
Cow position: | chr29:2690356-2690181 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 143 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 68, 157 |
Conread position: | 93-268 |
Cow position: | chr29:10647795-10647970 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 145 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 65, 157 |
Conread position: | 93-268 |
Cow position: | chr29:14586371-14586203 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 138 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 65, 123 |
Conread position: | 93-268 |
Cow position: | chr29:16022988-16022811 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 137 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 29, 159 |
Conread position: | 93-268 |
Cow position: | chr29:19622792-19622966 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 145 |
Alignm E-value: | 6.00036e-42 |
Alignm gaps (pig, cow): | 65, 136 |
Conread position: | 93-268 |
Cow position: | chr29:19653558-19653389 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 140 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 93-268 |
Cow position: | chr29:20251614-20251440 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 146 |
Alignm E-value: | 5.99756e-43 |
Alignm gaps (pig, cow): | 68, 136 |
Conread position: | 93-268 |
Cow position: | chr29:32540264-32540091 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 144 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 93-268 |
Cow position: | chr29:34799354-34799529 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 137 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 68, 157 |
Conread position: | 93-268 |
Cow position: | chr29:43323009-43322835 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 141 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 156, 0 |
Conread position: | 93-270 |
Cow position: | chr29:25932087-25932267 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 142 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 93-270 |
Cow position: | chr29:39079256-39079432 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 142 |
Alignm E-value: | 4e-38 |
Alignm gaps (pig, cow): | 68, 18 |
Conread position: | 93-270 |
Cow position: | chr29:45586912-45587088 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 144 |
Alignm E-value: | 5e-40 |
Alignm gaps (pig, cow): | 68, 157 |
Conread position: | 93-275 |
Cow position: | chr29:10823513-10823696 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 146 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 93-275 |
Cow position: | chr29:21426574-21426757 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 148 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 93-275 |
Cow position: | chr29:42650722-42650538 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 143 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 93-275 |
Cow position: | chr29:42802582-42802398 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 143 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 93-283 |
Cow position: | chr29:7430763-7430952 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 155 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 68, 157 |
Conread position: | 93-284 |
Cow position: | chr29:410070-410259 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 153 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 65, 118 |
Conread position: | 93-285 |
Cow position: | chr29:2840921-2841110 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 150 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 93-315 |
Cow position: | chr29:45460171-45459950 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 170 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 26, 120 |
Conread position: | 93-339 |
Cow position: | chr29:5958055-5957823 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 178 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 68, 120 |
Conread position: | 93-399 |
Cow position: | chr29:14085679-14085983 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 177 |
Conread position: | 95-291 |
Cow position: | chr29:4633943-4634141 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 141 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 96, 45 |
Conread position: | 96-268 |
Cow position: | chr29:6266047-6266220 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 145 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 35, 8 |
Conread position: | 96-268 |
Cow position: | chr29:15894404-15894577 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 133 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 96-268 |
Cow position: | chr29:40502531-40502703 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 142 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 65, 154 |
Conread position: | 96-283 |
Cow position: | chr29:23976287-23976107 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 145 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 98-245 |
Cow position: | chr29:7844775-7844627 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 117 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 98-245 |
Cow position: | chr29:16110859-16110712 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 112 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 63, 72 |
Conread position: | 98-245 |
Cow position: | chr29:18856499-18856648 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 118 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 98-258 |
Cow position: | chr29:27980478-27980636 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 123 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 63, 110 |
Conread position: | 98-266 |
Cow position: | chr29:610169-610337 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 127 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 63, 23 |
Conread position: | 98-266 |
Cow position: | chr29:669613-669782 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 128 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 98-266 |
Cow position: | chr29:19885512-19885345 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 129 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 63, 42 |
Conread position: | 98-267 |
Cow position: | chr29:13582512-13582343 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 127 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 62, 163 |
Conread position: | 98-267 |
Cow position: | chr29:27249899-27250069 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 130 |
Alignm E-value: | 5e-30 |
Alignm gaps (pig, cow): | 63, 75 |
Conread position: | 98-267 |
Cow position: | chr29:34925923-34925752 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 132 |
Alignm E-value: | 7e-33 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 98-269 |
Cow position: | chr29:15968417-15968588 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 129 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 63, 163 |
Conread position: | 101-246 |
Cow position: | chr29:35297311-35297164 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 115 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 103-397 |
Cow position: | chr29:802484-802789 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 221 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 33, 67 |
Conread position: | 141-275 |
Cow position: | chr29:12795976-12796109 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 14, 85 |
Conread position: | 141-275 |
Cow position: | chr29:21542960-21543096 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 103 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 141-275 |
Cow position: | chr29:27040363-27040499 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 141-448 |
Cow position: | chr29:105434-105124 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 215 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 20, 111 |
Conread position: | 148-274 |
Cow position: | chr29:16770522-16770396 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 10, 38 |
Conread position: | 148-275 |
Cow position: | chr29:34300369-34300496 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 108, 10 |
Conread position: | 148-275 |
Cow position: | chr29:35197066-35196937 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 105 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 177-407 |
Cow position: | chr29:9617663-9617425 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 171 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 84, 21 |
Show alignments to all cow chromosomes.