Cow genome map

Conread name: Lym2-sn47_F07.f

Conread position: 91-327
Cow position: chr29:5982260-5982485 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 67, 116

Conread position: 92-275
Cow position: chr29:26164366-26164549 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 148
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 69, 158

Conread position: 93-266
Cow position: chr29:38227435-38227263 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 143
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 68, 136

Conread position: 93-267
Cow position: chr29:9643304-9643477 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 141, 65

Conread position: 93-268
Cow position: chr29:48017-48199 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 148
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 68, 164

Conread position: 93-268
Cow position: chr29:2100301-2100126 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 144
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 65, 157

Conread position: 93-268
Cow position: chr29:2690356-2690181 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 68, 157

Conread position: 93-268
Cow position: chr29:10647795-10647970 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 145
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 65, 157

Conread position: 93-268
Cow position: chr29:14586371-14586203 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 65, 123

Conread position: 93-268
Cow position: chr29:16022988-16022811 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 29, 159

Conread position: 93-268
Cow position: chr29:19622792-19622966 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 145
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 65, 136

Conread position: 93-268
Cow position: chr29:19653558-19653389 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 140
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 65, 0

Conread position: 93-268
Cow position: chr29:20251614-20251440 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 146
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 68, 136

Conread position: 93-268
Cow position: chr29:32540264-32540091 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 144
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 65, 0

Conread position: 93-268
Cow position: chr29:34799354-34799529 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 68, 157

Conread position: 93-268
Cow position: chr29:43323009-43322835 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 141
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 156, 0

Conread position: 93-270
Cow position: chr29:25932087-25932267 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 68, 0

Conread position: 93-270
Cow position: chr29:39079256-39079432 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 142
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 68, 18

Conread position: 93-270
Cow position: chr29:45586912-45587088 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 68, 157

Conread position: 93-275
Cow position: chr29:10823513-10823696 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 146
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 62, 0

Conread position: 93-275
Cow position: chr29:21426574-21426757 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 148
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 65, 0

Conread position: 93-275
Cow position: chr29:42650722-42650538 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 47, 0

Conread position: 93-275
Cow position: chr29:42802582-42802398 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 47, 0

Conread position: 93-283
Cow position: chr29:7430763-7430952 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 155
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 68, 157

Conread position: 93-284
Cow position: chr29:410070-410259 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 153
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 65, 118

Conread position: 93-285
Cow position: chr29:2840921-2841110 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 150
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 62, 0

Conread position: 93-315
Cow position: chr29:45460171-45459950 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 26, 120

Conread position: 93-339
Cow position: chr29:5958055-5957823 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 68, 120

Conread position: 93-399
Cow position: chr29:14085679-14085983 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 177

Conread position: 95-291
Cow position: chr29:4633943-4634141 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 45

Conread position: 96-268
Cow position: chr29:6266047-6266220 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 145
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 35, 8

Conread position: 96-268
Cow position: chr29:15894404-15894577 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 65, 0

Conread position: 96-268
Cow position: chr29:40502531-40502703 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 142
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 65, 154

Conread position: 96-283
Cow position: chr29:23976287-23976107 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 11, 0

Conread position: 98-245
Cow position: chr29:7844775-7844627 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 98-245
Cow position: chr29:16110859-16110712 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 63, 72

Conread position: 98-245
Cow position: chr29:18856499-18856648 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 98-258
Cow position: chr29:27980478-27980636 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 63, 110

Conread position: 98-266
Cow position: chr29:610169-610337 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 63, 23

Conread position: 98-266
Cow position: chr29:669613-669782 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 98-266
Cow position: chr29:19885512-19885345 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 63, 42

Conread position: 98-267
Cow position: chr29:13582512-13582343 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 163

Conread position: 98-267
Cow position: chr29:27249899-27250069 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 63, 75

Conread position: 98-267
Cow position: chr29:34925923-34925752 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 63, 0

Conread position: 98-269
Cow position: chr29:15968417-15968588 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 63, 163

Conread position: 101-246
Cow position: chr29:35297311-35297164 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 103-397
Cow position: chr29:802484-802789 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 221
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 67

Conread position: 141-275
Cow position: chr29:12795976-12796109 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 14, 85

Conread position: 141-275
Cow position: chr29:21542960-21543096 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 141-275
Cow position: chr29:27040363-27040499 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 141-448
Cow position: chr29:105434-105124 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 111

Conread position: 148-274
Cow position: chr29:16770522-16770396 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 10, 38

Conread position: 148-275
Cow position: chr29:34300369-34300496 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 108, 10

Conread position: 148-275
Cow position: chr29:35197066-35196937 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 177-407
Cow position: chr29:9617663-9617425 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 21

Show alignments to all cow chromosomes.