Cow genome map


           Conread name:
           Lym2-sn47_F07.f
        

               Conread position:
               92-265
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               66, 158
               

               Conread position:
               93-198
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               93-214
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               66, 45
               

               Conread position:
               93-223
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-236
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               65, 85
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               146
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               70, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               66, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               70, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               145
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               65, 158
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-269
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               148
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               149
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               65, 157
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               68, 18
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               93-283
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               156
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               68, 128
               

               Conread position:
               93-320
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 24
               

               Conread position:
               93-399
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               65, 124
               

               Conread position:
               93-412
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 110
               

               Conread position:
               93-415
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 241
               

               Conread position:
               93-431
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               233
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               65, 121
               

               Conread position:
               94-267
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               67, 32
               

               Conread position:
               94-285
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               28, 68
               

               Conread position:
               96-275
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               62, 8
               

               Conread position:
               97-298
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               64, 25
               

               Conread position:
               98-244
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               98-246
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-267
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               98-267
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               98-268
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               63, 162
               

               Conread position:
               101-265
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-266
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               60, 48
               

               Conread position:
               101-266
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               60, 113
               

               Conread position:
               101-266
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 113
               

               Conread position:
               102-266
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               102-267
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               59, 148
               

               Conread position:
               103-397
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 281
               

               Conread position:
               105-253
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               14, 23
               

               Conread position:
               110-266
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               51, 119
               

               Conread position:
               121-266
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               138-266
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               7, 83
               

               Conread position:
               141-275
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               160-275
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               96, 0
               
Show alignments to all cow chromosomes.