Cow genome map


           Conread name:
           Lym2-sn47_F07.f
        

               Conread position:
               23-275
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 24
               

               Conread position:
               90-399
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 187
               

               Conread position:
               91-397
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 175
               

               Conread position:
               93-223
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 114
               

               Conread position:
               93-224
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-224
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-228
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-242
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               65, 47
               

               Conread position:
               93-264
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-266
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               68, 47
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               143
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               68, 156
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               65, 150
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               25, 89
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               38, 113
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               65, 105
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               68, 56
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               37, 68
               

               Conread position:
               93-270
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               146
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               148
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               68, 136
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               69, 147
               

               Conread position:
               93-283
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               154
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-289
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-292
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               65, 121
               

               Conread position:
               93-354
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               93-386
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               65, 122
               

               Conread position:
               94-267
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               94-404
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               225, 43
               

               Conread position:
               96-226
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-277
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-385
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               65, 42
               

               Conread position:
               98-215
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               98-258
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               63, 92
               

               Conread position:
               98-265
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               63, 89
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-267
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               98-267
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               98-295
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-333
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               60, 109
               

               Conread position:
               99-258
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               99-397
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               30, 18
               

               Conread position:
               102-268
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               103-398
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 51
               

               Conread position:
               110-397
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 112
               

               Conread position:
               111-267
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 153
               

               Conread position:
               111-459
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               47, 131
               

               Conread position:
               118-223
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               118-266
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               118-399
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               43, 132
               

               Conread position:
               122-281
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 139
               

               Conread position:
               129-266
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               130-266
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               132-275
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               26, 70
               

               Conread position:
               138-266
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 113
               

               Conread position:
               139-279
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               19, 107
               

               Conread position:
               141-275
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               14, 68
               

               Conread position:
               141-275
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               141-296
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 138
               

               Conread position:
               147-266
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               157-265
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               159-409
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               161-354
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               109, 83
               
Show alignments to all cow chromosomes.