Cow genome map


           Conread name:
           Lym2-sn47_F07.f
        

               Conread position:
               52-399
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 21
               

               Conread position:
               91-400
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 110
               

               Conread position:
               92-286
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               158
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               69, 137
               

               Conread position:
               92-292
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               14, 121
               

               Conread position:
               92-368
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               40, 31
               

               Conread position:
               93-214
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               93-224
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               65, 45
               

               Conread position:
               93-225
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               65, 71
               

               Conread position:
               93-241
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               11, 46
               

               Conread position:
               93-245
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-266
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               29, 139
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               34, 151
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               65, 159
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               41, 157
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               62, 157
               

               Conread position:
               93-267
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               65, 161
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               65, 8
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               70, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               68, 146
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               146
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               68, 157
               

               Conread position:
               93-268
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               68, 8
               

               Conread position:
               93-270
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               147
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               66, 157
               

               Conread position:
               93-270
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               146
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               62, 71
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               152
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               68, 96
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               62, 165
               

               Conread position:
               93-275
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               93-276
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               65, 48
               

               Conread position:
               93-315
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               190, 65
               

               Conread position:
               93-342
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               62, 25
               

               Conread position:
               93-346
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               62, 48
               

               Conread position:
               93-350
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               229, 6
               

               Conread position:
               93-399
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               221, 58
               

               Conread position:
               93-402
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 138
               

               Conread position:
               93-406
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 92
               

               Conread position:
               93-417
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 7
               

               Conread position:
               94-310
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               48, 30
               

               Conread position:
               95-257
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               66, 135
               

               Conread position:
               95-258
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               96-267
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               65, 8
               

               Conread position:
               96-350
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 145
               

               Conread position:
               96-387
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               60, 116
               

               Conread position:
               96-399
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               59, 18
               

               Conread position:
               98-200
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-222
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-244
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-245
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-258
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-266
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-268
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               98-269
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               98-269
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               63, 163
               

               Conread position:
               98-275
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               145
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               63, 152
               

               Conread position:
               99-234
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               101-246
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               74, 56
               

               Conread position:
               101-266
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-266
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               101-268
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               102-284
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               132, 9
               

               Conread position:
               102-386
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               59, 38
               

               Conread position:
               104-368
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               54, 34
               

               Conread position:
               107-245
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               54, 14
               

               Conread position:
               110-387
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               48, 162
               

               Conread position:
               114-397
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               42, 5
               

               Conread position:
               118-423
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 135
               

               Conread position:
               141-266
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               141-275
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               148-275
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               160-339
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               98, 119
               

               Conread position:
               162-460
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               115, 97
               

               Conread position:
               185-292
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               202-399
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               36, 161
               

               Conread position:
               207-411
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               111, 70
               
Show alignments to all cow chromosomes.